RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 OVCA2Q8WZ82 227 aa5.24□□□□□ -1.57
VPS13C-208ENST00000559119 NEUROG1Q92886 237 aa5.24□□□□□ -1.57
VPS13C-208ENST00000559119 EME1Q96AY2 570 aa5.24□□□□□ -1.57
VPS13C-208ENST00000559119 MED30Q96HR3 178 aa5.24□□□□□ -1.57
VPS13C-208ENST00000559119 FAM84BQ96KN1 310 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-208ENST00000559119 WDR83Q9BRX9 315 aaKnown RBP5.24□□□□□ -1.57
VPS13C-208ENST00000559119 UNKQ9C0B0 810 aaKnown RBP5.24□□□□□ -1.57
VPS13C-208ENST00000559119 BTBD1Q9H0C5 482 aa5.24□□□□□ -1.57
VPS13C-208ENST00000559119 PNPLA8Q9NP80 782 aa5.24□□□□□ -1.57
VPS13C-208ENST00000559119 RXFP3Q9NSD7 469 aa5.24□□□□□ -1.57
VPS13C-208ENST00000559119 A6NNC1 897 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 ZSCAN9O15535 394 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-208ENST00000559119 SGPL1O95470 568 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 STAT6P42226 847 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 GSTM5P46439 218 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 ZNF628Q5EBL2 1059 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 ACSM6Q6P461 480 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 TLDC1Q6P9B6 456 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 CLASRPQ8N2M8 674 aaKnown RBP5.23□□□□□ -1.57
VPS13C-208ENST00000559119 FAM47BQ8NA70 645 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 NUDCD2Q8WVJ2 157 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 ZFPM2Q8WW38 1151 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 ASB12Q8WXK4 309 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 LRRC46Q96FV0 321 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 EIF3CQ99613 913 aaKnown RBP5.23□□□□□ -1.57
VPS13C-208ENST00000559119 SLC8A2Q9UPR5 921 aa5.23□□□□□ -1.57
VPS13C-208ENST00000559119 FRMPD2Q68DX3 1309 aaPredicted RBP5.23□□□□□ -1.57
VPS13C-208ENST00000559119 RPS10-NUDT3A0A1W2PQS6 291 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 IL18RAPO95256 599 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 FGF3P11487 239 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-208ENST00000559119 HOXA11P31270 313 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-208ENST00000559119 ENTPD1P49961 510 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 LTBQ06643 244 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 DMWDQ09019 674 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 GRM3Q14832 879 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 NFATC4Q14934 902 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 TTLL5Q6EMB2 1281 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 LRIG3Q6UXM1 1119 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 DDIASQ8IXT1 998 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 LAS2Q8IYD9 372 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 ZBTB8BQ8NAP8 495 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-208ENST00000559119 LMLNQ96KR4 655 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 NUP62CLQ9H1M0 184 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 CDCP1Q9H5V8 836 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 TASP1Q9H6P5 420 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 HIF1ANQ9NWT6 349 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 LAMP3Q9UQV4 416 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 PCDHGB6Q9Y5F9 930 aa5.22□□□□□ -1.57
VPS13C-208ENST00000559119 TRIP12Q14669 1992 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-208ENST00000559119 RHODO00212 210 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 ALADP13716 330 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 EGR4Q05215 589 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 SEMA5AQ13591 1074 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 DAG1Q14118 895 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 P3H1Q32P28 736 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 MRNIPQ6NTE8 343 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 CCDC144NLQ6NUI1 221 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 ZNF474Q6S9Z5 364 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-208ENST00000559119 SLC39A5Q6ZMH5 540 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 USP43Q70EL4 1123 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 CCDC150Q8NCX0 1101 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 GLMPQ8WWB7 406 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 WNT16Q9UBV4 365 aa5.21□□□□□ -1.58
VPS13C-208ENST00000559119 TCF20Q9UGU0 1960 aaKnown RBP5.2□□□□□ -1.58
VPS13C-208ENST00000559119 A0A087WZ62 844 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 GOLGA6CA6NDK9 693 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 GOLGA6BA6NDN3 693 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 VSTM5A8MXK1 200 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 GOLGA6DP0CG33 693 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 SLC5A2P31639 672 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 KRTAP27-1Q3LI81 207 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 PHKBQ93100 1093 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 GPR78Q96P69 363 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 MAGEB5Q9BZ81 275 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 PRDM16Q9HAZ2 1276 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 GOLGA6AQ9NYA3 693 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 CORO2BQ9UQ03 480 aa5.2□□□□□ -1.58
VPS13C-208ENST00000559119 CLCA1A8K7I4 914 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 AREL1O15033 823 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 IFNA2P01563 188 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 RHCEP18577 417 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 MST1P26927 711 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 CBFBQ13951 182 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 KEAP1Q14145 624 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 GBX1Q14549 363 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 USP17L6PQ6QN14 398 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 ATP11CQ8NB49 1132 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 GRAMD1AQ96CP6 724 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 CLMNQ96JQ2 1002 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 ABHD14AQ9BUJ0 271 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 ELOVL1Q9BW60 279 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 APOL5Q9BWW9 433 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 PLK2Q9NYY3 685 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 MDFICQ9P1T7 246 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 TCEAL9Q9UHQ7 104 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 MYO6Q9UM54 1294 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 INSL5Q9Y5Q6 135 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 EID1Q9Y6B2 187 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 EVPLQ92817 2033 aa5.19□□□□□ -1.58
VPS13C-208ENST00000559119 IFITM10A6NMD0 228 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms