RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 OSCP1Q8WVF1 389 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 TEKT4Q8WW24 435 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 HSPH1Q92598 858 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 ATP2A3Q93084 1043 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 NXPE3Q969Y0 559 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 AZIN2Q96A70 460 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 HAPLN3Q96S86 360 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 PEBP4Q96S96 227 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 EPAS1Q99814 870 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 SNRNP25Q9BV90 132 aaKnown RBP6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 TRMT61BQ9BVS5 477 aaKnown RBP6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 DHX35Q9H5Z1 703 aaKnown RBP6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 BRD9Q9H8M2 597 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 TMPRSS4Q9NRS4 437 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 KCND1Q9NSA2 647 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 GPATCH2LQ9NWQ4 482 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 DUS2Q9NX74 493 aaKnown RBP6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 DDX56Q9NY93 547 aaKnown RBP6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 IGSF9Q9P2J2 1179 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 LIMD1Q9UGP4 676 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 FZD10Q9ULW2 581 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 HS3ST4Q9Y661 456 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 WNT6Q9Y6F9 365 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 OBSL1O75147 1896 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 DENND4AQ7Z401 1863 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 C5orf42Q9H799 3197 aa6.83□□□□□ -1.32
CHRNA3-204ENST00000559002 GOLGA6L7A0A1B0GV03 622 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CCDC66A2RUB6 948 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 LRRD1A4D1F6 860 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 LOC730098B7Z3J9 87 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 E9PAM4 449 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 H3BRJ5 948 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 EEF2KO00418 725 aaKnown RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 TRDMT1O14717 391 aaKnown RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CHADO15335 359 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 DAPK3O43293 454 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CREB3O43889 395 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 GREM1O60565 184 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 TSPAN3O60637 253 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 SRGAP2O75044 1071 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 ADH1CP00326 375 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 KLKB1P03952 638 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CYBBP04839 570 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 ASGR2P07307 311 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 RARAP10276 462 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CTNNA2P26232 953 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 IL1R2P27930 398 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CTNNA1P35221 906 aaKnown RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 GGCXP38435 758 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 ARL4AP40617 200 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CETN2P41208 172 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 DNA2P51530 1060 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 ZNF135P52742 658 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 VCPP55072 806 aaKnown RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 MLLT6P55198 1093 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CDH6P55285 790 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 RWDD2BP57060 319 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 TPI1P60174 286 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 GNG11P61952 73 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 ZP2Q05996 745 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 NR1H3Q13133 447 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 AUHQ13825 339 aaKnown RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 RPS6KA1Q15418 735 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 DPYSL2Q16555 572 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CA9Q16790 459 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 MPPE1Q53F39 396 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 FAM133BQ5BKY9 247 aaKnown RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 PPP6R3Q5H9R7 873 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 MS4A13Q5J8X5 152 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 PIK3R6Q5UE93 754 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 TTC39BQ5VTQ0 682 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 TRIM68Q6AZZ1 485 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 TXNRD3NBQ6F5E7 133 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 NADSYN1Q6IA69 706 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 RWDD4Q6NW29 188 aaKnown RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 RFWD3Q6PCD5 774 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 NT5DC3Q86UY8 548 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 ZSCAN30Q86W11 494 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CCDC50Q8IVM0 306 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 MAP7D3Q8IWC1 876 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 LGI2Q8N0V4 545 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 PYROXD2Q8N2H3 581 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CPXM2Q8N436 756 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CPA6Q8N4T0 437 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 KCTD6Q8NC69 237 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 HJURPQ8NCD3 748 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 CSGALNACT1Q8TDX6 532 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 UBE2Q2Q8WVN8 375 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 RSAD2Q8WXG1 361 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 IRF7Q92985 503 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 TBC1D31Q96DN5 1066 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 RBM41Q96IZ5 413 aaKnown RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 ZFYVE19Q96K21 471 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 RPRD1AQ96P16 312 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 LRRC3BQ96PB8 259 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 ASB2Q96Q27 587 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 KCTD15Q96SI1 283 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 IRX2Q9BZI1 471 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 PLA2G2FQ9BZM2 168 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms