RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 FHOD1Q9Y613 1164 aa22.31■■□□□ 1.16
CRNDE-205ENST00000558952 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 SLC30A4O14863 429 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 AP5Z1O43299 807 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 TRUB2O95900 331 aaKnown RBP22.3■■□□□ 1.16
CRNDE-205ENST00000558952 UCHL3P15374 230 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 HLA-FP30511 346 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 SLC6A4P31645 630 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 SGSHP51688 502 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 CDK17Q00537 523 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 STX1AQ16623 288 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 SPDYCQ5MJ68 293 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 FKBP15Q5T1M5 1219 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 OR6B2Q6IFH4 312 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 KIAA1324Q6UXG2 1013 aaKnown RBP22.3■■□□□ 1.16
CRNDE-205ENST00000558952 SERPINA13PQ6UXR4 307 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 C11orf57Q6ZUT1 292 aaPredicted RBP22.3■■□□□ 1.16
CRNDE-205ENST00000558952 CHST9Q7L1S5 443 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 TMEFF1Q8IYR6 380 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 FRMD1Q8N878 549 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 ANKRD20A12PQ8NF67 263 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 VPS16Q9H269 839 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 FAM204AQ9H8W3 233 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 CD248Q9HCU0 757 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 ASNSD1Q9NWL6 643 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 STIM2Q9P246 746 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 TJP2Q9UDY2 1190 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 SLC12A6Q9UHW9 1150 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 MBD1Q9UIS9 605 aaPredicted RBP22.3■■□□□ 1.16
CRNDE-205ENST00000558952 GGA2Q9UJY4 613 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 PLA2G4CQ9UP65 541 aa22.3■■□□□ 1.16
CRNDE-205ENST00000558952 SPAG17Q6Q759 2223 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 HSF2BPO75031 334 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 PABPC1P11940 636 aaKnown RBP22.29■■□□□ 1.16
CRNDE-205ENST00000558952 RPL6Q02878 288 aaKnown RBP22.29■■□□□ 1.16
CRNDE-205ENST00000558952 ENPP2Q13822 863 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 TAF5Q15542 800 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 CCDC183Q5T5S1 534 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 CDKAL1Q5VV42 579 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 NADSYN1Q6IA69 706 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 DPY19L2P1Q6NXN4 242 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 ARMCX6Q7L4S7 300 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 MFN1Q8IWA4 741 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 DEFB106AQ8N104 65 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 TMEM35BQ8NCS4 154 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 SORCS1Q8WY21 1168 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 PIGKQ92643 395 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 MRGPRX1Q96LB2 322 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 PLCB1Q9NQ66 1216 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 CYP8B1Q9UNU6 501 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 RALGAPA1Q6GYQ0 2036 aa22.29■■□□□ 1.16
CRNDE-205ENST00000558952 KHNYNO15037 678 aaKnown RBP22.28■■□□□ 1.16
CRNDE-205ENST00000558952 EPHX1P07099 455 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 SLC2A3P11169 496 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 CYP11B1P15538 503 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 DPP6P42658 865 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 KRT31Q15323 416 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 FUT11Q495W5 492 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 FNDC3BQ53EP0 1204 aaKnown RBP22.28■■□□□ 1.16
CRNDE-205ENST00000558952 ZC3H12AQ5D1E8 599 aaKnown RBP22.28■■□□□ 1.16
CRNDE-205ENST00000558952 LYSMD4Q5XG99 296 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 TMEM215Q68D42 235 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 IL31Q6EBC2 164 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 FAM183BPQ6ZVS7 135 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.28■■□□□ 1.16
CRNDE-205ENST00000558952 ATP6V0D2Q8N8Y2 350 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 RNF34Q969K3 372 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 BTN2A3PQ96KV6 586 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 STK33Q9BYT3 514 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 NUCKS1Q9H1E3 243 aaKnown RBP22.28■■□□□ 1.16
CRNDE-205ENST00000558952 PRDM16Q9HAZ2 1276 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 FANCLQ9NW38 375 aa22.28■■□□□ 1.16
CRNDE-205ENST00000558952 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.28■■□□□ 1.16
CRNDE-205ENST00000558952 SYNJ2BP-COX16A0A087WUM0 186 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 DCDC2BA2VCK2 349 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 GRAP2O75791 330 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 IGLV3-25P01717 112 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 ERBB2P04626 1255 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 ATP5BP06576 529 aaKnown RBP22.27■■□□□ 1.16
CRNDE-205ENST00000558952 POLR2EP19388 210 aaKnown RBP22.27■■□□□ 1.16
CRNDE-205ENST00000558952 ABCB4P21439 1286 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 LIMK1P53667 647 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 MYL5Q02045 173 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 CDH18Q13634 790 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 MS4A13Q5J8X5 152 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 MBLAC2Q68D91 279 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 TCEAL6Q6IPX3 200 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 CHSY1Q86X52 802 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 ZDHHC17Q8IUH5 632 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 TCEAL3Q969E4 200 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 PRICKLE1Q96MT3 831 aaPredicted RBP22.27■■□□□ 1.16
CRNDE-205ENST00000558952 SLC2A13Q96QE2 648 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 NAA15Q9BXJ9 866 aaKnown RBP22.27■■□□□ 1.16
CRNDE-205ENST00000558952 SLC6A17Q9H1V8 727 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 DDIT4Q9NX09 232 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 COX16Q9P0S2 106 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 WDR87Q6ZQQ6 2873 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 SPTBN4Q9H254 2564 aa22.27■■□□□ 1.16
CRNDE-205ENST00000558952 IGHV1OR15-9A0A0B4J2B8 117 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 F8VZ95 297 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms