RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 DHPSP49366 369 aaPredicted RBP16.1■□□□□ 0.17
CSHL1-208ENST00000558609 SGSHP51688 502 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 BPIFB4P59827 614 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 EIF4EBP2Q13542 120 aaPredicted RBP16.1■□□□□ 0.17
CSHL1-208ENST00000558609 ZNF234Q14588 700 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 STARD3Q14849 445 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 KLHDC7AQ5VTJ3 777 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 RFWD3Q6PCD5 774 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 SLC36A4Q6YBV0 504 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 TAC4Q86UU9 113 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 SLC47A2Q86VL8 602 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 WFIKKN2Q8TEU8 576 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 MRGPRX1Q96LB2 322 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 RXFP3Q9NSD7 469 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 ASNSD1Q9NWL6 643 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 TJP2Q9UDY2 1190 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 NUP205Q92621 2012 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 GON4LQ3T8J9 2241 aa16.1■□□□□ 0.17
CSHL1-208ENST00000558609 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 PES1O00541 588 aaKnown RBP16.09■□□□□ 0.17
CSHL1-208ENST00000558609 TBL1XO60907 577 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 TRUB2O95900 331 aaKnown RBP16.09■□□□□ 0.17
CSHL1-208ENST00000558609 ADRB1P08588 477 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 PNMA6AP0CW24 399 aaPredicted RBP16.09■□□□□ 0.17
CSHL1-208ENST00000558609 SNX16P57768 344 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 DRAP1Q14919 205 aaPredicted RBP16.09■□□□□ 0.17
CSHL1-208ENST00000558609 FUT11Q495W5 492 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 EFHC1Q5JVL4 640 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 CDKAL1Q5VV42 579 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 CYP2U1Q7Z449 544 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 METTL3Q86U44 580 aaKnown RBP16.09■□□□□ 0.17
CSHL1-208ENST00000558609 PASD1Q8IV76 773 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 TMEFF1Q8IYR6 380 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 ZNF557Q8N988 423 aaPredicted RBP16.09■□□□□ 0.17
CSHL1-208ENST00000558609 ADAM32Q8TC27 787 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 SORCS1Q8WY21 1168 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 NOX5Q96PH1 765 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 NAA15Q9BXJ9 866 aaKnown RBP16.09■□□□□ 0.17
CSHL1-208ENST00000558609 CIPCQ9C0C6 399 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 ABCB8Q9NUT2 735 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 FHOD1Q9Y613 1164 aa16.09■□□□□ 0.17
CSHL1-208ENST00000558609 CHD8Q9HCK8 2581 aa16.08■□□□□ 0.17
CSHL1-208ENST00000558609 IGHV1OR15-9A0A0B4J2B8 117 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 AP5Z1O43299 807 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 PABPC1P11940 636 aaKnown RBP16.08■□□□□ 0.16
CSHL1-208ENST00000558609 UCHL3P15374 230 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 DPP6P42658 865 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 PTGER3P43115 390 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 ARID5AQ03989 594 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 RAPGEF1Q13905 1077 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 TAF5Q15542 800 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 MS4A13Q5J8X5 152 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 TCEAL6Q6IPX3 200 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 C11orf57Q6ZUT1 292 aaPredicted RBP16.08■□□□□ 0.16
CSHL1-208ENST00000558609 CHST9Q7L1S5 443 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 ADIPOR2Q86V24 386 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 AHI1Q8N157 1196 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 HJURPQ8NCD3 748 aaPredicted RBP16.08■□□□□ 0.16
CSHL1-208ENST00000558609 C1orf131Q8NDD1 294 aaKnown RBP16.08■□□□□ 0.16
CSHL1-208ENST00000558609 FIBINQ8TAL6 211 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 WFDC5Q8TCV5 224 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 TCEAL3Q969E4 200 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 ERLEC1Q96DZ1 483 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 SLC2A13Q96QE2 648 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 PLCB1Q9NQ66 1216 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 TAB2Q9NYJ8 693 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 GGA2Q9UJY4 613 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 CEP83Q9Y592 693 aa16.08■□□□□ 0.16
CSHL1-208ENST00000558609 CNOT1A5YKK6 2376 aaKnown RBP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 KHNYNO15037 678 aaKnown RBP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 SYNCRIPO60506 623 aaKnown RBP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 HSF2BPO75031 334 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 APOEP02649 317 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 CYP11B1P15538 503 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 PRKCHP24723 683 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 CDH5P33151 784 aaPredicted RBP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 PITX1P78337 314 aaPredicted RBP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 CDK17Q00537 523 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 RPL6Q02878 288 aaKnown RBP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 DCAF6Q58WW2 860 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 ZC3H12AQ5D1E8 599 aaKnown RBP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 STPG1Q5TH74 334 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 LYSMD4Q5XG99 296 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 SASS6Q6UVJ0 657 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 OLFML1Q6UWY5 402 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 SERPINA13PQ6UXR4 307 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 SYT12Q8IV01 421 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 DEFB106AQ8N104 65 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 PIGKQ92643 395 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 MYEOVQ96EZ4 313 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 LMLNQ96KR4 655 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 BTN2A3PQ96KV6 586 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 PRICKLE1Q96MT3 831 aaPredicted RBP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 LSM14BQ9BX40 385 aaKnown RBP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 STK33Q9BYT3 514 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 MKRN2Q9H000 416 aaKnown RBP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 NUCKS1Q9H1E3 243 aaKnown RBP16.07■□□□□ 0.16
CSHL1-208ENST00000558609 SLC6A17Q9H1V8 727 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 PRDM16Q9HAZ2 1276 aa16.07■□□□□ 0.16
CSHL1-208ENST00000558609 ANO10Q9NW15 660 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms