RNA–Protein interactions for RNA: ENST00000558478.1

AL136295.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL136295.2, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL136295.2-201ENST00000558478 SLC12A8A0AV02 714 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 HIDE1A8MVS5 230 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 KCNU1A8MYU2 1149 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 PPP1R12AO14974 1030 aaPredicted RBP10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 GRM6O15303 877 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 NCAM2O15394 837 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 TTI1O43156 1089 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 MSI1O43347 362 aaKnown RBP10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 ITGAVP06756 1048 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 POU2F2P09086 479 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 SRGAP2BP0DMP2 458 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 GOT1P17174 413 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 DDX6P26196 483 aaKnown RBP eCLIP10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 SLC11A2P49281 568 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 EIF3EP60228 445 aaKnown RBP10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 GUCY2DQ02846 1103 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 CALCOCO2Q13137 446 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 XRCC4Q13426 336 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 SNX1Q13596 522 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 NOMO1Q15155 1222 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 CA9Q16790 459 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 FAM109BQ6ICB4 259 aaPredicted RBP10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 JAMLQ86YT9 394 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 TDHQ8IZJ6 230 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 BBOF1Q8ND07 529 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 PCDH19Q8TAB3 1148 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 ACTL9Q8TC94 416 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 RSAD2Q8WXG1 361 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 ATG4AQ8WYN0 398 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 TBC1D31Q96DN5 1066 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 SLC39A13Q96H72 371 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 C1orf74Q96LT6 269 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 CDCA3Q99618 268 aaPredicted RBP10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 DDX50Q9BQ39 737 aaKnown RBP10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 ERP44Q9BS26 406 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 PBX4Q9BYU1 374 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 BRD8Q9H0E9 1235 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 CCSER2Q9H7U1 834 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 MAN1C1Q9NR34 630 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 ARHGEF4Q9NR80 690 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 MTMR10Q9NXD2 777 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 ZDHHC7Q9NXF8 308 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 CWC15Q9P013 229 aaKnown RBP10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 NR2E1Q9Y466 385 aa10.55□□□□□ -0.72
AL136295.2-201ENST00000558478 ZNF638Q14966 1978 aaKnown RBP10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 SOBPA7XYQ1 873 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 HACD1B0YJ81 288 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 SGK1O00141 431 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 PAGE1O75459 146 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 ZMYND10O75800 440 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 STK10O94804 968 aaKnown RBP10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 CSPG5O95196 566 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 LATS1O95835 1130 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 MOCS2O96007 188 aaPredicted RBP10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 IGLV3-27P01718 113 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 SPATA31D3P0C874 917 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 RBP3P10745 1247 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 MX2P20592 715 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 IL4RP24394 825 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 DNAJB1P25685 340 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 EPHB2P29323 1055 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 STIP1P31948 543 aaKnown RBP10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 SLC7A5Q01650 507 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 SEMA3BQ13214 749 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 PTK6Q13882 451 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 DPYSQ14117 519 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 PDK1Q15118 436 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 ARHGAP15Q53QZ3 475 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 TTC27Q6P3X3 843 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 DARS2Q6PI48 645 aaKnown RBP10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 SPATA31D4Q6ZUB0 917 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 LZTR1Q8N653 840 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 PLD5Q8N7P1 536 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 SLC35B2Q8TB61 432 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 ARNTL2Q8WYA1 636 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 ANKRD7Q92527 254 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 FCRL2Q96LA5 508 aaPredicted RBP10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 SIK2Q9H0K1 926 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 NKX2-4Q9H2Z4 354 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 RETREG1Q9H6L5 497 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 EPB41L5Q9HCM4 733 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 ARFGAP3Q9NP61 516 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 ASIC3Q9UHC3 531 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 NUDT5Q9UKK9 219 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 DNPEPQ9ULA0 475 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 R3HDM2Q9Y2K5 976 aaKnown RBP10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 YBX2Q9Y2T7 364 aaKnown RBP10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 HEY1Q9Y5J3 304 aa10.54□□□□□ -0.72
AL136295.2-201ENST00000558478 TNRC18O15417 2968 aaPredicted RBP10.53□□□□□ -0.72
AL136295.2-201ENST00000558478 GBF1Q92538 1859 aa10.53□□□□□ -0.72
AL136295.2-201ENST00000558478 TRAV19A0A0A6YYK7 116 aa10.53□□□□□ -0.72
AL136295.2-201ENST00000558478 TYW5A2RUC4 315 aaKnown RBP10.53□□□□□ -0.72
AL136295.2-201ENST00000558478 H0YGN5 161 aa10.53□□□□□ -0.72
AL136295.2-201ENST00000558478 H7C0C1 242 aa10.53□□□□□ -0.72
AL136295.2-201ENST00000558478 MTSS1O43312 755 aa10.53□□□□□ -0.72
AL136295.2-201ENST00000558478 COCHO43405 550 aa10.53□□□□□ -0.72
AL136295.2-201ENST00000558478 CLASP2O75122 1294 aaKnown RBP10.53□□□□□ -0.72
AL136295.2-201ENST00000558478 LRIG2O94898 1065 aa10.53□□□□□ -0.72
AL136295.2-201ENST00000558478 OAS1P00973 400 aaKnown RBP10.53□□□□□ -0.72
AL136295.2-201ENST00000558478 F11P03951 625 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms