RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 MCEEQ96PE7 176 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PPP1R2P1Q96PQ5 205 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PAFAH2Q99487 392 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 MYLK2Q9H1R3 596 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 BRD9Q9H8M2 597 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 RPF1Q9H9Y2 349 aaKnown RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PLGRKTQ9HBL7 147 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 MOV10Q9HCE1 1003 aaKnown RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 LRRC4CQ9HCJ2 640 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 GPAMQ9HCL2 828 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 VTA1Q9NP79 307 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 GPRC5CQ9NQ84 441 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 METTL5Q9NRN9 209 aaKnown RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 INIPQ9NRY2 104 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CISHQ9NSE2 258 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 FBXO28Q9NVF7 368 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PRMT7Q9NVM4 692 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PPP1R14DQ9NXH3 145 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 NDE1Q9NXR1 346 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 EMC3Q9P0I2 261 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 COL20A1Q9P218 1284 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 KIF17Q9P2E2 1029 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 RABGEF1Q9UJ41 708 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 DNPEPQ9ULA0 475 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 RAD54BQ9Y620 910 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 ADGRA2Q96PE1 1338 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 LOC105371267A0A1B0GV96 52 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 FAM170AA1A519 330 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 BCLAF3A2AJT9 711 aaKnown RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 SPDYE5A6NIY4 337 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 ACKR2O00590 384 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 CST8O60676 142 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 KCNJ13O60928 360 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 GMNNO75496 209 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 DAB1O75553 588 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 STBD1O95210 358 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 MAP3K6O95382 1288 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 VNN1O95497 513 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 KRT75O95678 551 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 OXSR1O95747 527 aaPredicted RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 SLC25A27O95847 323 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 IFNB1P01574 187 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 PRKCBP05771 671 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 MCF2P10911 925 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 PIM1P11309 404 aaPredicted RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 TPSB2P20231 275 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 BTF3P20290 206 aaKnown RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 GPD1P21695 349 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 OSBPP22059 807 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 GLRA2P23416 452 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 ACAT1P24752 427 aaKnown RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 GRK2P25098 689 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 RPA3P35244 121 aaPredicted RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 PPARGP37231 505 aaPredicted RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 FDFT1P37268 417 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 PHKA2P46019 1235 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 PTDSS1P48651 473 aaKnown RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 PCYT1AP49585 367 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 VPS41P49754 854 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 CDK7P50613 346 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 STAT5BP51692 787 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 ZNF143P52747 638 aaPredicted RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 WDR4P57081 412 aaKnown RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 NLRP11P59045 1033 aaKnown RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 TAS2R40P59535 323 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 KCNJ2P63252 427 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 JAG1P78504 1218 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 SLC34A1Q06495 639 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 ASPHQ12797 758 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 KRT81Q14533 505 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 SQLEQ14534 574 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 TPSAB1Q15661 275 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 UGCGQ16739 394 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 FAM187BQ17R55 369 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 BBS9Q3SYG4 887 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 FSCBQ5H9T9 825 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 NOL9Q5SY16 702 aaKnown RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 ANGEL2Q5VTE6 544 aaKnown RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 SNX30Q5VWJ9 437 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 PPP2R2DQ66LE6 453 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 GPAT2Q6NUI2 795 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 AAGABQ6PD74 315 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 DARS2Q6PI48 645 aaKnown RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 CORO6Q6QEF8 472 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 METTL7BQ6UX53 244 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 SLC30A10Q6XR72 485 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 CCDC81Q6ZN84 652 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 FRA10AC1Q70Z53 315 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 CLNKQ7Z7G1 428 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 ITIH5Q86UX2 942 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 RFX6Q8HWS3 928 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 RHPN2Q8IUC4 686 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 IL31RAQ8NI17 732 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 ASAP3Q8TDY4 903 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 PPP4R1Q8TF05 950 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 GTF3C2Q8WUA4 911 aaPredicted RBP5.66□□□□□ -1.5
GABPB1-207ENST00000558335 SLC44A1Q8WWI5 657 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 STON2Q8WXE9 905 aa5.66□□□□□ -1.5
GABPB1-207ENST00000558335 ZNF516Q92618 1163 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms