RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 ADORA2BP29275 332 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 CRHR1P34998 444 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 HADHAP40939 763 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 CCNFP41002 786 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 ETV4P43268 484 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 SULT1E1P49888 294 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 RAB27AP51159 221 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 NCALDP61601 193 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 COG7P83436 770 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 ILF2Q12905 390 aaKnown RBP8.58□□□□□ -1.04
SPG11-209ENST00000558253 PRKD1Q15139 912 aaPredicted RBP8.58□□□□□ -1.04
SPG11-209ENST00000558253 SKIV2LQ15477 1246 aaKnown RBP8.58□□□□□ -1.04
SPG11-209ENST00000558253 MAPRE1Q15691 268 aaKnown RBP8.58□□□□□ -1.04
SPG11-209ENST00000558253 SLC1A5Q15758 541 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 TBCCQ15814 346 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 FSCN1Q16658 493 aaKnown RBP8.58□□□□□ -1.04
SPG11-209ENST00000558253 INSCQ1MX18 579 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 HP1BP3Q5SSJ5 553 aaPredicted RBP8.58□□□□□ -1.04
SPG11-209ENST00000558253 FAM91A1Q658Y4 838 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 KCNT2Q6UVM3 1135 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 SH2D5Q6ZV89 423 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 PIGZQ86VD9 579 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 CAND1Q86VP6 1230 aaKnown RBP8.58□□□□□ -1.04
SPG11-209ENST00000558253 FITM2Q8N6M3 262 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 STAMBPL1Q96FJ0 436 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 UROC1Q96N76 676 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 PPP1R10Q96QC0 940 aaKnown RBP8.58□□□□□ -1.04
SPG11-209ENST00000558253 PTPN18Q99952 460 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 MTG1Q9BT17 334 aaPredicted RBP8.58□□□□□ -1.04
SPG11-209ENST00000558253 TSSK1BQ9BXA7 367 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 PRKD2Q9BZL6 878 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 LRMDAQ9H2I8 198 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 ZNF408Q9H9D4 720 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 SPC25Q9HBM1 224 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 PRDM9Q9NQV7 894 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 MTMR10Q9NXD2 777 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 MOCS1Q9NZB8 636 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 DTLQ9NZJ0 730 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 IGSF9Q9P2J2 1179 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 LNPEPQ9UIQ6 1025 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 GINS2Q9Y248 185 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 TTLL3Q9Y4R7 772 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 TRPV2Q9Y5S1 764 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 USP3Q9Y6I4 520 aa8.58□□□□□ -1.04
SPG11-209ENST00000558253 E7ENQ6 273 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 PPEF2O14830 753 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 ZNF623O75123 536 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 ATP2C2O75185 946 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 CELF2O95319 508 aaKnown RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 ATP6V1G2O95670 118 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 LMNAP02545 664 aaKnown RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 THP07101 528 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 FGFR1P11362 822 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 NEFHP12036 1026 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 CCDC130P13994 396 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 PGAM1P18669 254 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 AKAP5P24588 427 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 LMO2P25791 158 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 SERPINB6P35237 376 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 ADRA1BP35368 520 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 GARSP41250 739 aaKnown RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 MRPS6P82932 125 aaKnown RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 DEUP1Q05D60 604 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 ADCY1Q08828 1119 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 FAAP100Q0VG06 881 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 KRT72Q14CN4 511 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 ZKSCAN8Q15776 578 aaPredicted RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 RAB41Q5JT25 222 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 SPANXN3Q5MJ09 141 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 ANKRD20A2Q5SQ80 823 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 WLSQ5T9L3 541 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 ANKRD20A1Q5TYW2 823 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 ANKRD20A3Q5VUR7 823 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 NCBP2-AS2Q69YL0 99 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 ITPRIPL1Q6GPH6 555 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 TWF2Q6IBS0 349 aaKnown RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 CGB2Q6NT52 195 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 UNC5AQ6ZN44 842 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 CAPN12Q6ZSI9 719 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 MARK2Q7KZI7 788 aaKnown RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 OTOAQ7RTW8 1153 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 MRPL10Q7Z7H8 261 aaKnown RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 LCA5Q86VQ0 697 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 METTL23Q86XA0 190 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 CTAGE3PQ8IX95 158 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 DEFB106AQ8N104 65 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 ZNF276Q8N554 614 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 PPM1NQ8N819 430 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 SMG8Q8ND04 991 aaKnown RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 RNF139Q8WU17 664 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 C10orf82Q8WW14 230 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 PGBD4Q96DM1 585 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 CFAP36Q96G28 342 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 PIWIL1Q96J94 861 aaKnown RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 SIGLEC10Q96LC7 697 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 C7orf26Q96N11 449 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 KCTD15Q96SI1 283 aaPredicted RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 WDR83Q9BRX9 315 aaKnown RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 MED10Q9BTT4 135 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 DPEP3Q9H4B8 488 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms