RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 GRM4Q14833 912 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 GGT6Q6P531 493 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 DEF8Q6ZN54 512 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 GLCCI1Q86VQ1 547 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 RHPN2Q8IUC4 686 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.85□□□□□ -1.79
SPG11-206ENST00000558093 NRSN1Q8IZ57 195 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 ADPRHL1Q8NDY3 354 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 SRFBP1Q8NEF9 429 aaKnown RBP3.85□□□□□ -1.79
SPG11-206ENST00000558093 SVIPQ8NHG7 77 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 NPIPB3Q92617 1050 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 TMEM41AQ96HV5 264 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 REXO5Q96IC2 774 aaKnown RBP3.85□□□□□ -1.79
SPG11-206ENST00000558093 ZNF845Q96IR2 970 aaPredicted RBP3.85□□□□□ -1.79
SPG11-206ENST00000558093 GPR78Q96P69 363 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 TRMOQ9BU70 441 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 HTATIP2Q9BUP3 242 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 AGO4Q9HCK5 861 aaKnown RBP3.85□□□□□ -1.79
SPG11-206ENST00000558093 SLC52A1Q9NWF4 448 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 NFU1Q9UMS0 254 aa3.85□□□□□ -1.79
SPG11-206ENST00000558093 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.84□□□□□ -1.79
SPG11-206ENST00000558093 GXYLT2A0PJZ3 443 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 MYMKA6NI61 221 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 AQP12BA6NM10 295 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 UGDHO60701 494 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 ALDOAP04075 364 aaKnown RBP3.84□□□□□ -1.79
SPG11-206ENST00000558093 KLRK1P26718 216 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 NR4A2P43354 598 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 ME1P48163 572 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 POLGP54098 1239 aaPredicted RBP3.84□□□□□ -1.79
SPG11-206ENST00000558093 DMWDQ09019 674 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 TRIM71Q2Q1W2 868 aaKnown RBP3.84□□□□□ -1.79
SPG11-206ENST00000558093 ZNF260Q3ZCT1 412 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 ZNF569Q5MCW4 686 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 LIPMQ5VYY2 423 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 PGBD2Q6P3X8 592 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 UBE2Q1Q7Z7E8 422 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 MORC1Q86VD1 984 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 RFX6Q8HWS3 928 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 LAS2Q8IYD9 372 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 ARFGAP1Q8N6T3 406 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 ZNF366Q8N895 744 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 ZNF527Q8NB42 609 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 BCAS4Q8TDM0 211 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 P2RY11Q96G91 374 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 PAAF1Q9BRP4 392 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 TUBB6Q9BUF5 446 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 CCDC134Q9H6E4 229 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 MOV10Q9HCE1 1003 aaKnown RBP3.84□□□□□ -1.79
SPG11-206ENST00000558093 ERVK-5Q9HDB9 667 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 KCNK9Q9NPC2 374 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 PAPOLBQ9NRJ5 636 aaKnown RBP3.84□□□□□ -1.79
SPG11-206ENST00000558093 POT1Q9NUX5 634 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 IGSF9Q9P2J2 1179 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 HEY2Q9UBP5 337 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 HS3ST3B1Q9Y662 390 aa3.84□□□□□ -1.79
SPG11-206ENST00000558093 TBC1D3DA0A087WVF3 549 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 TBC1D3IA0A087WXS9 549 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 TBC1D3EA0A087X179 549 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 TBC1D3KA0A087X1G2 549 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 DPPA5A6NC42 116 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 TBC1D3BA6NDS4 549 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 TBC1D3FA6NER0 549 aaPredicted RBP3.83□□□□□ -1.8
SPG11-206ENST00000558093 GOLGA6L3A6NEY3 463 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 C3orf70A6NLC5 250 aaPredicted RBP3.83□□□□□ -1.8
SPG11-206ENST00000558093 TBC1D3LB9A6J9 549 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 H3BNX3 289 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 NKX2-8O15522 239 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 FFAR2O15552 330 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 DHHO43323 396 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 DNPH1O43598 174 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 CNOT3O75175 753 aaKnown RBP3.83□□□□□ -1.8
SPG11-206ENST00000558093 SKAP2O75563 359 aaPredicted RBP3.83□□□□□ -1.8
SPG11-206ENST00000558093 RPP40O75818 363 aaKnown RBP3.83□□□□□ -1.8
SPG11-206ENST00000558093 TBC1D3HP0C7X1 549 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 SETSIPP0DME0 302 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 GRK5P34947 590 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 SOX2P48431 317 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 ZNF84P51523 738 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 TAS2R50P59544 299 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 TNFAIP2Q03169 654 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 AAK1Q2M2I8 961 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 BTBD16Q32M84 506 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 EARS2Q5JPH6 523 aaKnown RBP3.83□□□□□ -1.8
SPG11-206ENST00000558093 TBC1D3GQ6DHY5 549 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 TBC1D3CQ6IPX1 549 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 LRIG3Q6UXM1 1119 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 TRABD2AQ86V40 505 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 PIM3Q86V86 326 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 TBC1D3Q8IZP1 549 aaPredicted RBP3.83□□□□□ -1.8
SPG11-206ENST00000558093 FAM47BQ8NA70 645 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 FAM71BQ8TC56 605 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 STYXQ8WUJ0 223 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 ZFPM2Q8WW38 1151 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 ZBTB9Q96C00 473 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 MCRS1Q96EZ8 462 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 ZFYVE19Q96K21 471 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 TMEM120AQ9BXJ8 343 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 MLXIPLQ9NP71 852 aa3.83□□□□□ -1.8
SPG11-206ENST00000558093 CHST12Q9NRB3 414 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms