RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 FCRL2Q96LA5 508 aaPredicted RBP21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 EPAS1Q99814 870 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 UBE2OQ9C0C9 1292 aaKnown RBP21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 ADAM7Q9H2U9 754 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 RXFP1Q9HBX9 757 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 PCDH9Q9HC56 1237 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 COMMD8Q9NX08 183 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 HSFX1Q9UBD0 423 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 INSL5Q9Y5Q6 135 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 GREB1Q4ZG55 1949 aa21.08■□□□□ 0.97
SNRPA1-205ENST00000558036 SPDYE4A6NLX3 237 aa21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 HIDE1A8MVS5 230 aa21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 DCLK1O15075 740 aa21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 DHX9Q08211 1270 aaKnown RBP21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 PPP2R5DQ14738 602 aa21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 RWDD4Q6NW29 188 aaKnown RBP21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 TMC3Q7Z5M5 1100 aa21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 MTERF4Q7Z6M4 381 aaKnown RBP21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 TCEAL8Q8IYN2 117 aa21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 NPWQ8N729 165 aa21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 SLC39A13Q96H72 371 aa21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 LGMNQ99538 433 aa21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 USP29Q9HBJ7 922 aa21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 ENTPD7Q9NQZ7 604 aa21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 ANAPC5Q9UJX4 755 aa21.08■□□□□ 0.96
SNRPA1-205ENST00000558036 SLC12A8A0AV02 714 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 ATP8B1O43520 1251 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 CSH1P0DML2 217 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 CSH2P0DML3 217 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 ITIH2P19823 946 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 RPL22P35268 128 aaKnown RBP21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 NR2C2P49116 596 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 PLPP4Q5VZY2 271 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 DNAJC17Q9NVM6 304 aaKnown RBP21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 ATP8A1Q9Y2Q0 1164 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 HS3ST4Q9Y661 456 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 ZNF840PA6NDX5 716 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 FAM193AP78312 1265 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 CCDC25Q86WR0 208 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 OLFM3Q96PB7 478 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 HAPLN3Q96S86 360 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 OSBPL2Q9H1P3 480 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 MTIF3Q9H2K0 278 aaKnown RBP21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 NEU3Q9UQ49 428 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 PLXNA4Q9HCM2 1894 aa21.07■□□□□ 0.96
SNRPA1-205ENST00000558036 CHKAP35790 457 aa21.06■□□□□ 0.96
SNRPA1-205ENST00000558036 VEPH1Q14D04 833 aa21.06■□□□□ 0.96
SNRPA1-205ENST00000558036 PIK3R6Q5UE93 754 aa21.06■□□□□ 0.96
SNRPA1-205ENST00000558036 DNAJB7Q7Z6W7 309 aaPredicted RBP21.06■□□□□ 0.96
SNRPA1-205ENST00000558036 C14orf80Q86SX3 495 aa21.06■□□□□ 0.96
SNRPA1-205ENST00000558036 POF1BQ8WVV4 589 aa21.06■□□□□ 0.96
SNRPA1-205ENST00000558036 CEP295NLQ96MC4 621 aa21.06■□□□□ 0.96
SNRPA1-205ENST00000558036 OLA1Q9NTK5 396 aaKnown RBP21.06■□□□□ 0.96
SNRPA1-205ENST00000558036 CEP290O15078 2479 aa21.06■□□□□ 0.96
SNRPA1-205ENST00000558036 HSPA9P38646 679 aaKnown RBP21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 HCAR3P49019 387 aa21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 ARTNQ5T4W7 220 aa21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 RHBDF2Q6PJF5 856 aa21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 CCHCR1Q8TD31 782 aa21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 MTRF1LQ9UGC7 380 aaKnown RBP21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 STIP1P31948 543 aaKnown RBP21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 CREMQ03060 361 aa21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 PAFAH1B3Q15102 231 aaKnown RBP21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 TRIP4Q15650 581 aaPredicted RBP21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 UAP1Q16222 522 aaPredicted RBP21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 SLC45A4Q5BKX6 768 aa21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 SYCP2LQ5T4T6 812 aa21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 UBAP2Q5T6F2 1119 aaKnown RBP21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 MYRFLQ96LU7 910 aa21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 KLHL5Q96PQ7 755 aa21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 NACA2Q9H009 215 aa21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 STK39Q9UEW8 545 aa21.05■□□□□ 0.96
SNRPA1-205ENST00000558036 BCLAF3A2AJT9 711 aaKnown RBP21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 DNALI1O14645 258 aaPredicted RBP21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 CA3P07451 260 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 HSD17B3P37058 310 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 KCNQ1P51787 676 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 EPHB3P54753 998 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 HIBCHQ6NVY1 386 aaPredicted RBP21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 GPR65Q8IYL9 337 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 MREGQ8N565 214 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 CCNYQ8ND76 341 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 SPPL3Q8TCT6 385 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 QKIQ96PU8 341 aaKnown RBP eCLIP21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 ZNF334Q9HCZ1 680 aaPredicted RBP21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 TPX2Q9ULW0 747 aaKnown RBP21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 SSX2IPQ9Y2D8 614 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 C2orf78A6NCI8 922 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 COCHO43405 550 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 APOEP02649 317 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 VAV1P15498 845 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 MAGEA10P43363 369 aaPredicted RBP21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 SHHQ15465 462 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 CDKL3Q8IVW4 592 aaPredicted RBP21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 PDZD8Q8NEN9 1154 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 CCDC110Q8TBZ0 833 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 MICAL1Q8TDZ2 1067 aa21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 UBLCP1Q8WVY7 318 aaPredicted RBP21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 CELF6Q96J87 481 aaKnown RBP21.04■□□□□ 0.96
SNRPA1-205ENST00000558036 CEP41Q9BYV8 373 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms