RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 PGAP3Q96FM1 320 aaPredicted RBP14.87□□□□□ -0.03
USP3-205ENST00000557884 BTN2A3PQ96KV6 586 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 NELL2Q99435 816 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 TRIM7Q9C029 511 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 TKTL2Q9H0I9 626 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 THAP2Q9H0W7 228 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 WDCPQ9H6R7 721 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 ANLNQ9NQW6 1124 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 ARHGEF4Q9NR80 690 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 TMPRSS4Q9NRS4 437 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 DNAJC17Q9NVM6 304 aaKnown RBP14.87□□□□□ -0.03
USP3-205ENST00000557884 STOML2Q9UJZ1 356 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 NENFQ9UMX5 172 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 SNX10Q9Y5X0 201 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 ZDBF2Q9HCK1 2354 aa14.87□□□□□ -0.03
USP3-205ENST00000557884 F5P12259 2224 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 CCP110O43303 1012 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 TBL1XO60907 577 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 TULP3O75386 442 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 PAGE1O75459 146 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 F9P00740 461 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 PENKP01210 267 aaPredicted RBP14.86□□□□□ -0.03
USP3-205ENST00000557884 CHRNB1P11230 501 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 TACR2P21452 398 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 AVPR2P30518 371 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 PTPN9P43378 593 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 GALCP54803 685 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 MPPE1Q53F39 396 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 PIK3R6Q5UE93 754 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 BNIPLQ7Z465 357 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 ETFBKMTQ8IXQ9 262 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 LGI2Q8N0V4 545 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 EXOC4Q96A65 974 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 TMA16Q96EY4 203 aaKnown RBP14.86□□□□□ -0.03
USP3-205ENST00000557884 PRICKLE1Q96MT3 831 aaPredicted RBP14.86□□□□□ -0.03
USP3-205ENST00000557884 XPO6Q96QU8 1125 aaKnown RBP14.86□□□□□ -0.03
USP3-205ENST00000557884 PNKPQ96T60 521 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 DDX50Q9BQ39 737 aaKnown RBP14.86□□□□□ -0.03
USP3-205ENST00000557884 PACSIN1Q9BY11 444 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 OSBPL6Q9BZF3 934 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 SIK2Q9H0K1 926 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 STIM2Q9P246 746 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 DEC1Q9P2X7 70 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 CLEC4EQ9ULY5 219 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 SCINQ9Y6U3 715 aa14.86□□□□□ -0.03
USP3-205ENST00000557884 GOLGA6L3A6NEY3 463 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 I6L893 689 aaPredicted RBP14.85□□□□□ -0.03
USP3-205ENST00000557884 GFRA2O00451 464 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 NCAM2O15394 837 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 CACNG3O60359 315 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 DRD1P21728 446 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 PSMA2P25787 234 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 HOXD9P28356 352 aaPredicted RBP14.85□□□□□ -0.03
USP3-205ENST00000557884 ZNF143P52747 638 aaPredicted RBP14.85□□□□□ -0.03
USP3-205ENST00000557884 SEC13P55735 322 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 HDAC4P56524 1084 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 RPS24P62847 133 aaKnown RBP14.85□□□□□ -0.03
USP3-205ENST00000557884 FZD5Q13467 585 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 CCINQ13939 588 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 LRRC32Q14392 662 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 MS4A13Q5J8X5 152 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 BRMS1LQ5PSV4 323 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 GRAMD4Q6IC98 578 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 Q6ZS52 159 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 C14orf80Q86SX3 495 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 CFAP52Q8N1V2 620 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 EZH1Q92800 747 aaPredicted RBP14.85□□□□□ -0.03
USP3-205ENST00000557884 CNPY3Q9BT09 278 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 ARHGEF38Q9NXL2 777 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 PAXBP1Q9Y5B6 917 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 HS3ST4Q9Y661 456 aa14.85□□□□□ -0.03
USP3-205ENST00000557884 ANTXRLA6NF34 631 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 TMEM191CA6NGB0 347 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.84□□□□□ -0.03
USP3-205ENST00000557884 F5H5T6 163 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 ENDOD1O94919 500 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 KAT7O95251 611 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 APODP05090 189 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 CYP1A2P05177 515 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 H2AFZP0C0S5 128 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 EIF2DP41214 584 aaKnown RBP14.84□□□□□ -0.03
USP3-205ENST00000557884 DGKGP49619 791 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 AUHQ13825 339 aaKnown RBP14.84□□□□□ -0.03
USP3-205ENST00000557884 DGKKQ5KSL6 1271 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 SCYL2Q6P3W7 929 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 H2AFVQ71UI9 128 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 STRADAQ7RTN6 431 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 CIR1Q86X95 450 aaPredicted RBP14.84□□□□□ -0.03
USP3-205ENST00000557884 PHTF2Q8N3S3 785 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 HJURPQ8NCD3 748 aaPredicted RBP14.84□□□□□ -0.03
USP3-205ENST00000557884 CENPIQ92674 756 aaPredicted RBP14.84□□□□□ -0.03
USP3-205ENST00000557884 CLDN23Q96B33 292 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 PANX2Q96RD6 677 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 PRMT1Q99873 361 aaKnown RBP14.84□□□□□ -0.03
USP3-205ENST00000557884 NUP85Q9BW27 656 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 GRPEL1Q9HAV7 217 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 MRPL47Q9HD33 250 aaKnown RBP14.84□□□□□ -0.03
USP3-205ENST00000557884 DLGAP2Q9P1A6 1054 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 VANGL2Q9ULK5 521 aa14.84□□□□□ -0.03
USP3-205ENST00000557884 TYW5A2RUC4 315 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms