RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TMEM253P0C7T8 217 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 GRIA2P42262 883 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 TNFRSF4P43489 277 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 ZNF135P52742 658 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-234ENST00000557703 NRG1Q02297 640 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-234ENST00000557703 NME3Q13232 169 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 PIGHQ14442 188 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-234ENST00000557703 TCEAL1Q15170 157 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 ANO4Q32M45 955 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 RABGAP1LQ5R372 815 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 PIK3R6Q5UE93 754 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 TMEM25Q86YD3 366 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 PSTKQ8IV42 348 aaKnown RBP14.19□□□□□ -0.14
SHMT2-234ENST00000557703 RHOT2Q8IXI1 618 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 ETFBKMTQ8IXQ9 262 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 HJURPQ8NCD3 748 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-234ENST00000557703 ADAM32Q8TC27 787 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 NTAN1Q96AB6 310 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 CFAP57Q96MR6 1250 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 MCEEQ96PE7 176 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 PNKPQ96T60 521 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 TBCBQ99426 244 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 CHP1Q99653 195 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 GRPEL1Q9HAV7 217 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 PIGVQ9NUD9 493 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 DONSONQ9NYP3 566 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 COL4A2P08572 1712 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 FAM170BA6NMN3 283 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 F5H5T6 163 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 MYO1FO00160 1098 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 NRDCO43847 1150 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 ATG13O75143 517 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 APODP05090 189 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 TYRP14679 529 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 HTR7P34969 479 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 GALCP54803 685 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 GFPT1Q06210 699 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-234ENST00000557703 SCAPQ12770 1279 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 SLC12A1Q13621 1099 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 CCINQ13939 588 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 SPA17Q15506 151 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 C5orf22Q49AR2 442 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 FAM133BQ5BKY9 247 aaKnown RBP14.18□□□□□ -0.14
SHMT2-234ENST00000557703 MS4A13Q5J8X5 152 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 FYB2Q5VWT5 728 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 ZNF687Q8N1G0 1237 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 NIPA2Q8N8Q9 360 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 JOSD2Q8TAC2 188 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 DDI1Q8WTU0 396 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 WBP2Q969T9 261 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 OSBPL2Q9H1P3 480 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 IP6K2Q9UHH9 426 aa14.18□□□□□ -0.14
SHMT2-234ENST00000557703 SHISA7A6NL88 538 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 NEDD8-MDP1E9PL57 170 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 ADRA1BP35368 520 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 PCK1P35558 622 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 OPRD1P41143 372 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 ARHGAP25P42331 645 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 GALK1P51570 392 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 RPL7AP62424 266 aaKnown RBP14.17□□□□□ -0.14
SHMT2-234ENST00000557703 UBXN2BQ14CS0 331 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 EIF4HQ15056 248 aaKnown RBP14.17□□□□□ -0.14
SHMT2-234ENST00000557703 GAB4Q2WGN9 574 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 OTUD1Q5VV17 481 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-234ENST00000557703 LRRC31Q6UY01 552 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 TPGS1Q6ZTW0 290 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 EMC1Q8N766 993 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 CCDC112Q8NEF3 446 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 FLCNQ8NFG4 579 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 FAM172AQ8WUF8 416 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 UBE2Q2Q8WVN8 375 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 PRMT1Q99873 361 aaKnown RBP14.17□□□□□ -0.14
SHMT2-234ENST00000557703 BAG1Q99933 345 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-234ENST00000557703 TKTL2Q9H0I9 626 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 THAP2Q9H0W7 228 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 C11orf16Q9NQ32 467 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 PPARGC1AQ9UBK2 798 aaKnown RBP14.17□□□□□ -0.14
SHMT2-234ENST00000557703 STARD13Q9Y3M8 1113 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 MYOFQ9NZM1 2061 aa14.17□□□□□ -0.14
SHMT2-234ENST00000557703 TULP3O75386 442 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 PAGE1O75459 146 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 CLDN11O75508 207 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 MTA2O94776 668 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 CHRNB1P11230 501 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 TACR2P21452 398 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 PSMA2P25787 234 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 DGKGP49619 791 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 HDAC4P56524 1084 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 PITX1P78337 314 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-234ENST00000557703 KRT83P78385 493 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 MRPS21P82921 87 aaKnown RBP14.16□□□□□ -0.14
SHMT2-234ENST00000557703 ATP11AP98196 1134 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 DMC1Q14565 340 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 GRAMD4Q6IC98 578 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 TRNP1Q6NT89 227 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 CHST9Q7L1S5 443 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 TRMT11Q7Z4G4 463 aaKnown RBP14.16□□□□□ -0.14
SHMT2-234ENST00000557703 CHSY1Q86X52 802 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 FIBINQ8TAL6 211 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 WFIKKN2Q8TEU8 576 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms