RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 THOC5Q13769 683 aaKnown RBP3.44□□□□□ -1.86
TRAV28-201ENST00000557548 CBFBQ13951 182 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 BECN1Q14457 450 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 CYP2A13Q16696 494 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 ST3GAL2Q16842 350 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 UBAP2Q5T6F2 1119 aaKnown RBP3.44□□□□□ -1.86
TRAV28-201ENST00000557548 SLFN13Q68D06 897 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 NAIF1Q69YI7 327 aaPredicted RBP3.44□□□□□ -1.86
TRAV28-201ENST00000557548 TCTN3Q6NUS6 607 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 KLHL24Q6TFL4 600 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 DPY19L3Q6ZPD9 716 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 Q6ZRM9 215 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 SZRD1Q7Z422 152 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 GDF7Q7Z4P5 450 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 ANKRD23Q86SG2 305 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 ADGRG6Q86SQ4 1221 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 ANKRD35Q8N283 1001 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 TTC39CQ8N584 583 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 RFWD2Q8NHY2 731 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 ETNPPLQ8TBG4 499 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 RUFY2Q8WXA3 655 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 USP6NLQ92738 828 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 NACC2Q96BF6 587 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 R3HDM4Q96D70 268 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 MASTLQ96GX5 879 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 LENG8Q96PV6 779 aaPredicted RBP3.44□□□□□ -1.86
TRAV28-201ENST00000557548 ASB2Q96Q27 587 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 DPCDQ9BVM2 203 aaPredicted RBP3.44□□□□□ -1.86
TRAV28-201ENST00000557548 MXD3Q9BW11 206 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 GPR87Q9BY21 358 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 SYNCQ9H7C4 482 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 SYNPO2LQ9H987 977 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 GLOD4Q9HC38 313 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 PDE11AQ9HCR9 933 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 CD320Q9NPF0 282 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 SEMA4BQ9NPR2 832 aaPredicted RBP3.44□□□□□ -1.86
TRAV28-201ENST00000557548 SH3GLB2Q9NR46 395 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 PCDHB16Q9NRJ7 776 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 ALKBH4Q9NXW9 302 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 SARDHQ9UL12 918 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 ZNF215Q9UL58 517 aaPredicted RBP3.44□□□□□ -1.86
TRAV28-201ENST00000557548 MAP3K2Q9Y2U5 619 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 MAGED1Q9Y5V3 778 aaPredicted RBP3.44□□□□□ -1.86
TRAV28-201ENST00000557548 SLC30A1Q9Y6M5 507 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 KDM3AQ9Y4C1 1321 aa3.44□□□□□ -1.86
TRAV28-201ENST00000557548 TRGV11A0A075B6L2 103 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 A1L4Q6 167 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 NPIPB15A6NHN6 443 aaPredicted RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 A8MVJ9 347 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 GOLGA6L6A8MZA4 724 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 PTGES3LE9PB15 166 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 PSMD9O00233 223 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 SPRY2O43597 315 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 TUBB4AP04350 444 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 RPN1P04843 607 aaKnown RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 CFIP05156 583 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 FESP07332 822 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 TNNT1P13805 278 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 CXCR5P32302 372 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 MCM5P33992 734 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 HADHAP40939 763 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 GPD2P43304 727 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 SCNN1GP51170 649 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 RARSP54136 660 aaKnown RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 FOXL2P58012 376 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 HHEXQ03014 270 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 CHAF1BQ13112 559 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 ACVR2BQ13705 512 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 NAA25Q14CX7 972 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 RUNDC3AQ59EK9 446 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 SLC30A6Q6NXT4 461 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 INO80CQ6PI98 192 aaPredicted RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 MAMDC4Q6UXC1 1216 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 IKBIPQ70UQ0 350 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 HTR3DQ70Z44 454 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 MAVSQ7Z434 540 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 MON1AQ86VX9 555 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 SGMS1Q86VZ5 419 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 RAB11FIP4Q86YS3 637 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 TMEM132CQ8N3T6 1108 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 ZNF808Q8N4W9 903 aaPredicted RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 SRBD1Q8N5C6 995 aaKnown RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 CCDC191Q8NCU4 936 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 ZCCHC10Q8TBK6 192 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 SOCS4Q8WXH5 440 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 TBC1D5Q92609 795 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 FAM120BQ96EK7 910 aaKnown RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 RNFT2Q96EX2 444 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 TRMT61AQ96FX7 289 aaKnown RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 CALML4Q96GE6 196 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 PRR11Q96HE9 360 aaPredicted RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 VPS50Q96JG6 964 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 ZMAT2Q96NC0 199 aaKnown RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 NAP1L5Q96NT1 182 aaPredicted RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 DCLRE1CQ96SD1 692 aaKnown RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 EYA3Q99504 573 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 LBHD1Q9BQE6 289 aaPredicted RBP3.43□□□□□ -1.86
TRAV28-201ENST00000557548 ALOXE3Q9BYJ1 711 aa3.43□□□□□ -1.86
TRAV28-201ENST00000557548 FTOQ9C0B1 505 aaKnown RBP eCLIP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms