RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 A0A1B0GUL7 405 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 VWA3AA6NCI4 1184 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 F5H697 171 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 NPHP1O15259 732 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 YY2O15391 372 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 UNC5CO95185 931 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 CCDC175P0C221 793 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 ELFN1P0C7U0 828 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 PPP3CBP16298 524 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 MCM3P25205 808 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 OAS2P29728 719 aaKnown RBP5.16□□□□□ -1.58
ATXN3-246ENST00000557030 NPTX2P47972 431 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 ELLP55199 621 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-246ENST00000557030 HNRNPH2P55795 449 aaKnown RBP5.16□□□□□ -1.58
ATXN3-246ENST00000557030 GNG11P61952 73 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 GBX1Q14549 363 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 SMC1AQ14683 1233 aaKnown RBP5.16□□□□□ -1.58
ATXN3-246ENST00000557030 GRM3Q14832 879 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 LLGL1Q15334 1064 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 SAFBQ15424 915 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-246ENST00000557030 MAP9Q49MG5 647 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 LEKR1Q6ZMV7 388 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 KRBA2Q6ZNG9 492 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 RD3Q7Z3Z2 195 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 MB21D2Q8IYB1 491 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-246ENST00000557030 CNNM3Q8NE01 707 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 TOR1AIP2Q8NFQ8 470 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 TIFAQ96CG3 184 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 CCDC51Q96ER9 411 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 NEUROD6Q96NK8 337 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 PANX2Q96RD6 677 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 CTAGE1Q96RT6 745 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 P2RX7Q99572 595 aaKnown RBP5.16□□□□□ -1.58
ATXN3-246ENST00000557030 TIMP4Q99727 224 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 DUSP26Q9BV47 211 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 UTP14AQ9BVJ6 771 aaKnown RBP5.16□□□□□ -1.58
ATXN3-246ENST00000557030 TTYH3Q9C0H2 523 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-246ENST00000557030 SIK2Q9H0K1 926 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 PTGFRNQ9P2B2 879 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 LRIT1Q9P2V4 623 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 SLIT2O94813 1529 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 CDHR2Q9BYE9 1310 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 STK36Q9NRP7 1315 aa5.16□□□□□ -1.58
ATXN3-246ENST00000557030 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 VWC2LB2RUY7 222 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 AKR1B15C9JRZ8 316 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-246ENST00000557030 ZNF213O14771 459 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 POLR3GO15318 223 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-246ENST00000557030 PEX1O43933 1283 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 KIF5CO60282 957 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 CAND2O75155 1236 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 STARD3NLO95772 234 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 IGLV2-14P01704 120 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 KITP10721 976 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 NDUFV1P49821 464 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 METAP2P50579 478 aaKnown RBP eCLIP5.15□□□□□ -1.59
ATXN3-246ENST00000557030 C21orf58P58505 322 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 BOP1Q14137 746 aaKnown RBP5.15□□□□□ -1.59
ATXN3-246ENST00000557030 TRIM14Q14142 442 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 GALEQ14376 348 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 ZSCAN26Q16670 478 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 WHAMMP3Q1A5X7 153 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 FILIP1LQ4L180 1135 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 TTC39AQ5SRH9 613 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 SYCE2Q6PIF2 218 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 NPNTQ6UXI9 565 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 KIF6Q6ZMV9 814 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 SRGAP1Q7Z6B7 1085 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 TMEM139Q8IV31 216 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 FAM109AQ8N4B1 249 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 BOLLQ8N9W6 283 aaKnown RBP5.15□□□□□ -1.59
ATXN3-246ENST00000557030 B3GALNT2Q8NCR0 500 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 MYCBPAPQ8TBZ2 947 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 CCDC12Q8WUD4 166 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-246ENST00000557030 PMM1Q92871 262 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 SMARCE1Q969G3 411 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 ZMAT3Q9HA38 289 aaKnown RBP5.15□□□□□ -1.59
ATXN3-246ENST00000557030 RAI14Q9P0K7 980 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 MYO1AQ9UBC5 1043 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.15□□□□□ -1.59
ATXN3-246ENST00000557030 RAD54BQ9Y620 910 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 WNK3Q9BYP7 1800 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 SPEF2Q9C093 1822 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 MROH7-TTC4A0A0A0MT08 1334 aa5.15□□□□□ -1.59
ATXN3-246ENST00000557030 A0A087WWV3 80 aa5.14□□□□□ -1.59
ATXN3-246ENST00000557030 A0A088AWK7 358 aa5.14□□□□□ -1.59
ATXN3-246ENST00000557030 A0A0B4J269 797 aa5.14□□□□□ -1.59
ATXN3-246ENST00000557030 A0A1W2PPL8 197 aa5.14□□□□□ -1.59
ATXN3-246ENST00000557030 KIF28PB7ZC32 967 aa5.14□□□□□ -1.59
ATXN3-246ENST00000557030 MAP2K7O14733 419 aa5.14□□□□□ -1.59
ATXN3-246ENST00000557030 PROP1O75360 226 aa5.14□□□□□ -1.59
ATXN3-246ENST00000557030 RPS6KA5O75582 802 aa5.14□□□□□ -1.59
ATXN3-246ENST00000557030 WDHD1O75717 1129 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-246ENST00000557030 TUSC2O75896 110 aa5.14□□□□□ -1.59
ATXN3-246ENST00000557030 DNAJB5O75953 348 aa5.14□□□□□ -1.59
ATXN3-246ENST00000557030 SEC31AO94979 1220 aaKnown RBP5.14□□□□□ -1.59
ATXN3-246ENST00000557030 BMP15O95972 392 aa5.14□□□□□ -1.59
ATXN3-246ENST00000557030 GRPP07492 148 aa5.14□□□□□ -1.59
ATXN3-246ENST00000557030 CHRM2P08172 466 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms