RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 CSPG4P5Q96PW8 444 aa24.57■■□□□ 1.52
SIX4-203ENST00000556952 LRRC3Q9BY71 257 aa24.57■■□□□ 1.52
SIX4-203ENST00000556952 NACA2Q9H009 215 aa24.57■■□□□ 1.52
SIX4-203ENST00000556952 TMPRSS4Q9NRS4 437 aa24.57■■□□□ 1.52
SIX4-203ENST00000556952 KCNU1A8MYU2 1149 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 FGF19O95750 216 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 OAS1P00973 400 aaKnown RBP24.56■■□□□ 1.52
SIX4-203ENST00000556952 POU2F2P09086 479 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 ZFXP17010 805 aaPredicted RBP24.56■■□□□ 1.52
SIX4-203ENST00000556952 CCNG2Q16589 344 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 LEXMQ3ZCV2 418 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 SLC9A4Q6AI14 798 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 MIB1Q86YT6 1006 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 CCDC26Q8TAB7 109 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 EPAS1Q99814 870 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 ASAH2Q9NR71 780 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 ZDHHC7Q9NXF8 308 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 CWC15Q9P013 229 aaKnown RBP24.56■■□□□ 1.52
SIX4-203ENST00000556952 CD207Q9UJ71 328 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 CDH22Q9UJ99 828 aa24.56■■□□□ 1.52
SIX4-203ENST00000556952 A0A0C4DFX4 3053 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 SLC12A8A0AV02 714 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 APOC4-APOC2K7ER74 178 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 COCHO43405 550 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 APOC2P02655 101 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 CDC25CP30307 473 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 HTR7P34969 479 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 HCAR3P49019 387 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 ACBD5Q5T8D3 534 aaPredicted RBP24.55■■□□□ 1.52
SIX4-203ENST00000556952 GPR161Q8N6U8 529 aaKnown RBP24.55■■□□□ 1.52
SIX4-203ENST00000556952 PCDH19Q8TAB3 1148 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 GCNAQ96QF7 691 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 DCLK3Q9C098 648 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 DZANK1Q9NVP4 752 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 PCYOX1Q9UHG3 505 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 SLC12A6Q9UHW9 1150 aa24.55■■□□□ 1.52
SIX4-203ENST00000556952 EEF2KO00418 725 aaKnown RBP24.54■■□□□ 1.52
SIX4-203ENST00000556952 APOL1O14791 398 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 CCL16O15467 120 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 GOT1P17174 413 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 TGM2P21980 687 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 GABRR2P28476 465 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 DHX34Q14147 1143 aaKnown RBP24.54■■□□□ 1.52
SIX4-203ENST00000556952 NUGGCQ68CJ6 796 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 DRICH1Q6PGQ1 229 aaPredicted RBP24.54■■□□□ 1.52
SIX4-203ENST00000556952 CCDC137Q6PK04 289 aaKnown RBP24.54■■□□□ 1.52
SIX4-203ENST00000556952 MAATS1Q7Z4T9 603 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 ATP6V0D2Q8N8Y2 350 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 SMRP1Q8NCR6 262 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 C1orf54Q8WWF1 131 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 MAGEB5Q9BZ81 275 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 S1PR5Q9H228 398 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 OR12D3Q9UGF7 316 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 R3HDM2Q9Y2K5 976 aaKnown RBP24.54■■□□□ 1.52
SIX4-203ENST00000556952 DOCK6Q96HP0 2047 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 CLUHO75153 1309 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 TARSL2A2RTX5 802 aaKnown RBP24.54■■□□□ 1.52
SIX4-203ENST00000556952 GRXCR2A6NFK2 248 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 CREB3O43889 395 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 XYLBO75191 536 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 PAGE1O75459 146 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 RFPL2O75678 378 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 COILP38432 576 aaPredicted RBP24.54■■□□□ 1.52
SIX4-203ENST00000556952 EPHA5P54756 1037 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 DYNLT1P63172 113 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 COG7P83436 770 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 NRG1Q02297 640 aaPredicted RBP24.54■■□□□ 1.52
SIX4-203ENST00000556952 ELF2Q15723 593 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 RARS2Q5T160 578 aaKnown RBP24.54■■□□□ 1.52
SIX4-203ENST00000556952 PQLC3Q8N755 202 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 LEMD2Q8NC56 503 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 ATXN2LQ8WWM7 1075 aaKnown RBP24.54■■□□□ 1.52
SIX4-203ENST00000556952 MRPS31Q92665 395 aaKnown RBP24.54■■□□□ 1.52
SIX4-203ENST00000556952 BTN2A3PQ96KV6 586 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 LRRC1Q9BTT6 524 aa24.54■■□□□ 1.52
SIX4-203ENST00000556952 RHOXF2BP0C7M4 288 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 PFKLP17858 780 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 TPI1P60174 286 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 RFX8Q6ZV50 586 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 UNC45BQ8IWX7 931 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 ATG4AQ8WYN0 398 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 RUBCNQ92622 972 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 PLD4Q96BZ4 506 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 C1orf74Q96LT6 269 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 RHOXF2Q9BQY4 288 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 CORO1BQ9BR76 489 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 ARHGEF4Q9NR80 690 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 AMACRQ9UHK6 382 aa24.53■■□□□ 1.52
SIX4-203ENST00000556952 C2orf78A6NCI8 922 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 SPDYE4A6NLX3 237 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 MBTPS2O43462 519 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 RAD51CO43502 376 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 OLFM2O95897 454 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 HOXB8P17481 243 aaPredicted RBP24.52■■□□□ 1.52
SIX4-203ENST00000556952 PTPN2P17706 415 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 DPYSQ14117 519 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 NAA30Q147X3 362 aaPredicted RBP24.52■■□□□ 1.52
SIX4-203ENST00000556952 TTC27Q6P3X3 843 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 TMC5Q6UXY8 1006 aa24.52■■□□□ 1.52
SIX4-203ENST00000556952 GAREM2Q75VX8 874 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms