RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 WASHC5Q12768 1159 aa10.45□□□□□ -0.74
TMEM260-211ENST00000556648 CBLBQ13191 982 aa10.45□□□□□ -0.74
TMEM260-211ENST00000556648 PDK4Q16654 411 aa10.45□□□□□ -0.74
TMEM260-211ENST00000556648 INTS6LQ5JSJ4 861 aaKnown RBP10.45□□□□□ -0.74
TMEM260-211ENST00000556648 PSTKQ8IV42 348 aaKnown RBP10.45□□□□□ -0.74
TMEM260-211ENST00000556648 UNC5BQ8IZJ1 945 aa10.45□□□□□ -0.74
TMEM260-211ENST00000556648 COLGALT1Q8NBJ5 622 aa10.45□□□□□ -0.74
TMEM260-211ENST00000556648 STKLD1Q8NE28 680 aa10.45□□□□□ -0.74
TMEM260-211ENST00000556648 GORASP1Q9BQQ3 440 aa10.45□□□□□ -0.74
TMEM260-211ENST00000556648 CNGB3Q9NQW8 809 aa10.45□□□□□ -0.74
TMEM260-211ENST00000556648 HAUS2Q9NVX0 235 aa10.45□□□□□ -0.74
TMEM260-211ENST00000556648 DDIT4Q9NX09 232 aa10.45□□□□□ -0.74
TMEM260-211ENST00000556648 MRPL42Q9Y6G3 142 aaKnown RBP10.45□□□□□ -0.74
TMEM260-211ENST00000556648 PATJQ8NI35 1801 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 PTPRDP23468 1912 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 A0A0U1RQF3 1178 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 WDR27A2RRH5 827 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 HACD1B0YJ81 288 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 C9IYK1 514 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 ZNF623O75123 536 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 SUN1O94901 812 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 MT-ND3P03897 115 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 INHBAP08476 426 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 OR4Q2P0C623 313 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 PYGBP11216 843 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 PRKCHP24723 683 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 NEK3P51956 506 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 IFRD2Q12894 506 aaPredicted RBP10.44□□□□□ -0.74
TMEM260-211ENST00000556648 SEMA3BQ13214 749 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 ITGA7Q13683 1181 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 PAFAH1B3Q15102 231 aaKnown RBP10.44□□□□□ -0.74
TMEM260-211ENST00000556648 HHATQ5VTY9 493 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 FAM171BQ6P995 826 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 SH2D5Q6ZV89 423 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 TAC4Q86UU9 113 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 ECHDC2Q86YB7 292 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 CNPY4Q8N129 248 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 ZNF567Q8N184 647 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 ZNF276Q8N554 614 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 PDCD7Q8N8D1 485 aaKnown RBP10.44□□□□□ -0.74
TMEM260-211ENST00000556648 CCNYQ8ND76 341 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 SCAMP5Q8TAC9 235 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 RSPH1Q8WYR4 309 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 ACTR5Q9H9F9 607 aaPredicted RBP10.44□□□□□ -0.74
TMEM260-211ENST00000556648 CSNK1G1Q9HCP0 422 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 FBXW11Q9UKB1 542 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 SLC12A4Q9UP95 1085 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 ARL2BPQ9Y2Y0 163 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 CASP8AP2Q9UKL3 1982 aa10.44□□□□□ -0.74
TMEM260-211ENST00000556648 TRIM49D1C9J1S8 452 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 KCNK1O00180 336 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 APOEP02649 317 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 PCSK1P29120 753 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 RAB27AP51159 221 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 TPI1P60174 286 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 GRIK3Q13003 919 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 ZNF598Q86UK7 904 aaKnown RBP10.43□□□□□ -0.74
TMEM260-211ENST00000556648 LINC01599Q8WXQ3 324 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 PTPRN2Q92932 1015 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 EBNA1BP2Q99848 306 aaKnown RBP10.43□□□□□ -0.74
TMEM260-211ENST00000556648 PITPNM3Q9BZ71 974 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 TRPV6Q9H1D0 765 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 SLC40A1Q9NP59 571 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 SSU72Q9NP77 194 aaKnown RBP10.43□□□□□ -0.74
TMEM260-211ENST00000556648 PHTF1Q9UMS5 762 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 IQANK1A0A1B0GTG1 560 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 H0YHG0 523 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 M0QZQ0 153 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 EDF1O60869 148 aaKnown RBP10.43□□□□□ -0.74
TMEM260-211ENST00000556648 SPAG6O75602 509 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 ZWINTO95229 277 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 CYP11A1P05108 521 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 MGAT1P26572 445 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 CST5P28325 142 aaPredicted RBP10.43□□□□□ -0.74
TMEM260-211ENST00000556648 GBP2P32456 591 aaPredicted RBP10.43□□□□□ -0.74
TMEM260-211ENST00000556648 GLUD2P49448 558 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 SESN2P58004 480 aaPredicted RBP10.43□□□□□ -0.74
TMEM260-211ENST00000556648 SCAPQ12770 1279 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 TUSC3Q13454 348 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 MBTPS1Q14703 1052 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 BSPRYQ5W0U4 402 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 TRAF7Q6Q0C0 670 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 RGS9BPQ6ZS82 235 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 CDHR3Q6ZTQ4 885 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 RTN4RL1Q86UN2 441 aaPredicted RBP10.43□□□□□ -0.74
TMEM260-211ENST00000556648 SLC26A11Q86WA9 606 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 ZNF280BQ86YH2 543 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 CCDC63Q8NA47 563 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 LRRC8CQ8TDW0 803 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 ZNF75CPQ92670 426 aaPredicted RBP10.43□□□□□ -0.74
TMEM260-211ENST00000556648 NTAN1Q96AB6 310 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 APOPT1Q96IL0 206 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 FRMD8Q9BZ67 464 aaPredicted RBP10.43□□□□□ -0.74
TMEM260-211ENST00000556648 TKTL2Q9H0I9 626 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 NOD1Q9Y239 953 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 PCDHA11Q9Y5I1 949 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 IKBKGQ9Y6K9 419 aa10.43□□□□□ -0.74
TMEM260-211ENST00000556648 MYO18AQ92614 2054 aaKnown RBP10.42□□□□□ -0.74
TMEM260-211ENST00000556648 MYO16Q9Y6X6 1858 aa10.42□□□□□ -0.74
TMEM260-211ENST00000556648 SF3B1O75533 1304 aaKnown RBP eCLIP10.42□□□□□ -0.749e-6■■■■■ 68.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms