RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 PRDM16Q9HAZ2 1276 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 FAM114A2Q9NRY5 505 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 DTLQ9NZJ0 730 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 NEU3Q9UQ49 428 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 YBX2Q9Y2T7 364 aaKnown RBP11.2□□□□□ -0.62
LINC01550-206ENST00000556462 MCF2LO15068 1137 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 FAM153BP0C7A2 387 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 ETS1P14921 441 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 ERCC2P18074 760 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 CLCN4P51793 760 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 ZNF135P52742 658 aaPredicted RBP11.2□□□□□ -0.62
LINC01550-206ENST00000556462 GDF10P55107 478 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 MLLT6P55198 1093 aaPredicted RBP11.2□□□□□ -0.62
LINC01550-206ENST00000556462 PLD1Q13393 1074 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 PAFAH1B3Q15102 231 aaKnown RBP11.2□□□□□ -0.62
LINC01550-206ENST00000556462 TAF12Q16514 161 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 FAM153CQ494X1 144 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 MANEALQ5VSG8 457 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 KLHDC10Q6PID8 442 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 ZDHHC24Q6UX98 284 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 B4GALNT4Q76KP1 1039 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 GSTA5Q7RTV2 222 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 UNC45BQ8IWX7 931 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 KREMEN2Q8NCW0 462 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 TGS1Q96RS0 853 aaKnown RBP11.2□□□□□ -0.62
LINC01550-206ENST00000556462 SIK2Q9H0K1 926 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 IL21Q9HBE4 155 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 USP29Q9HBJ7 922 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 ZNF334Q9HCZ1 680 aaPredicted RBP11.2□□□□□ -0.62
LINC01550-206ENST00000556462 ZDHHC18Q9NUE0 388 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 TRPM5Q9NZQ8 1165 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 FAM153AQ9UHL3 310 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 PCDHA11Q9Y5I1 949 aa11.2□□□□□ -0.62
LINC01550-206ENST00000556462 SLC12A8A0AV02 714 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 COCHO43405 550 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 KRT14P02533 472 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 F11P03951 625 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 ZSCAN5DPP0CG00 497 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 SLC2A3P11169 496 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 ATP5C1P36542 298 aaKnown RBP11.19□□□□□ -0.62
LINC01550-206ENST00000556462 PBX2P40425 430 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 TPI1P60174 286 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 ERVK-21P61565 698 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 RING1Q06587 406 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 HLTFQ14527 1009 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC01550-206ENST00000556462 MAP9Q49MG5 647 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 HECTD3Q5T447 861 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 CCDC89Q8N998 374 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 MICAL1Q8TDZ2 1067 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC01550-206ENST00000556462 C1orf74Q96LT6 269 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 GDAP1L1Q96MZ0 367 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 OLFM3Q96PB7 478 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 CDK5RAP1Q96SZ6 601 aaKnown RBP11.19□□□□□ -0.62
LINC01550-206ENST00000556462 EPAS1Q99814 870 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 GDF15Q99988 308 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 FUT8Q9BYC5 575 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 RNF38Q9H0F5 515 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 DNMT3LQ9UJW3 386 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 ASB3Q9Y575 518 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 HS3ST4Q9Y661 456 aa11.19□□□□□ -0.62
LINC01550-206ENST00000556462 SGK1O00141 431 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 MOCS2O96007 188 aaPredicted RBP11.18□□□□□ -0.62
LINC01550-206ENST00000556462 GLUD1P00367 558 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 OAS1P00973 400 aaKnown RBP11.18□□□□□ -0.62
LINC01550-206ENST00000556462 C8AP07357 584 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 SRGAP2BP0DMP2 458 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 EPHB2P29323 1055 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 STIP1P31948 543 aaKnown RBP11.18□□□□□ -0.62
LINC01550-206ENST00000556462 PPP3CCP48454 512 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 TUBP50607 506 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 NRLP54845 237 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 NRG1Q02297 640 aaPredicted RBP11.18□□□□□ -0.62
LINC01550-206ENST00000556462 XRCC4Q13426 336 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 PIK3R6Q5UE93 754 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 EMBQ6PCB8 327 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 DARS2Q6PI48 645 aaKnown RBP11.18□□□□□ -0.62
LINC01550-206ENST00000556462 CCDC149Q6ZUS6 474 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 C14orf80Q86SX3 495 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 ITIH5Q86UX2 942 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 FAM71DQ8N9W8 422 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 FBXO25Q8TCJ0 367 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 LRRN4Q8WUT4 740 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 SAMD11Q96NU1 681 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 LRRC3Q9BY71 257 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 UXTQ9UBK9 157 aaPredicted RBP11.18□□□□□ -0.62
LINC01550-206ENST00000556462 ASIC3Q9UHC3 531 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 BCLAF3A2AJT9 711 aaKnown RBP11.18□□□□□ -0.62
LINC01550-206ENST00000556462 C2orf78A6NCI8 922 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 H3BNC9 293 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 H7C0C1 242 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 MFSD11O43934 449 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 IFNB1P01574 187 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 HMBSP08397 361 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 ITIH2P19823 946 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 HOXC13P31276 330 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 ADCY8P40145 1251 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 ATP5OP48047 213 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 VPS41P49754 854 aa11.18□□□□□ -0.62
LINC01550-206ENST00000556462 KCNQ1P51787 676 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms