RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 MSI1O43347 362 aaKnown RBP13.1□□□□□ -0.31
SNX6-207ENST00000556303 ATP5BP06576 529 aaKnown RBP13.1□□□□□ -0.31
SNX6-207ENST00000556303 ATXN8OSP0DMR3 200 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 SLC2A3P11169 496 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 HLA-FP30511 346 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 OXTRP30559 389 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 YWHAZP63104 245 aaKnown RBP13.1□□□□□ -0.31
SNX6-207ENST00000556303 ZNF33AQ06730 810 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 PDCLQ13371 301 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 ZNF234Q14588 700 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 ARHGAP44Q17R89 818 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 DUOXA1Q1HG43 343 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 FUT11Q495W5 492 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 VWA3BQ502W6 1294 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 FAM133BQ5BKY9 247 aaKnown RBP13.1□□□□□ -0.31
SNX6-207ENST00000556303 PPM1JQ5JR12 505 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 TMEM215Q68D42 235 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 FIBINQ8TAL6 211 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 DQX1Q8TE96 717 aaKnown RBP13.1□□□□□ -0.31
SNX6-207ENST00000556303 FCRL2Q96LA5 508 aaPredicted RBP13.1□□□□□ -0.31
SNX6-207ENST00000556303 TUBGCP2Q9BSJ2 902 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 CIPCQ9C0C6 399 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 PRDM16Q9HAZ2 1276 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 TMEM9BQ9NQ34 198 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 ITM2CQ9NQX7 267 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 RXFP3Q9NSD7 469 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 USP36Q9P275 1121 aaKnown RBP13.1□□□□□ -0.31
SNX6-207ENST00000556303 SLC12A6Q9UHW9 1150 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 CEP83Q9Y592 693 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 CEP295Q9C0D2 2601 aa13.1□□□□□ -0.31
SNX6-207ENST00000556303 PCNX2A6NKB5 2137 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 E5RJQ4 531 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 PIK3R2O00459 728 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 TSPAN3O60637 253 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 NDUFS2O75306 463 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 CALCAP01258 141 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 IGLV3-19P01714 112 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 IGLV3-25P01717 112 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 APOEP02649 317 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 ADRB1P08588 477 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 DLDP09622 509 aaKnown RBP13.09□□□□□ -0.31
SNX6-207ENST00000556303 PABPC1P11940 636 aaKnown RBP13.09□□□□□ -0.31
SNX6-207ENST00000556303 EEF1GP26641 437 aaKnown RBP13.09□□□□□ -0.31
SNX6-207ENST00000556303 CD6P30203 668 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 KRT9P35527 623 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 USP8P40818 1118 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 PTGER3P43115 390 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 EIF4EBP2Q13542 120 aaPredicted RBP13.09□□□□□ -0.31
SNX6-207ENST00000556303 CKAP5Q14008 2032 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 DPCR1Q3MIW9 517 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 TRIM61Q5EBN2 209 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 EFHC1Q5JVL4 640 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 SYCP2LQ5T4T6 812 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 GJB7Q6PEY0 223 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 SERPINA13PQ6UXR4 307 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 ADIPOR2Q86V24 386 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 TMPRSS6Q8IU80 811 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 ZDHHC17Q8IUH5 632 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 CCDC117Q8IWD4 279 aaPredicted RBP13.09□□□□□ -0.31
SNX6-207ENST00000556303 FRMD1Q8N878 549 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 KDM1BQ8NB78 822 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 HJURPQ8NCD3 748 aaPredicted RBP13.09□□□□□ -0.31
SNX6-207ENST00000556303 CADM4Q8NFZ8 388 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 PRCCQ92733 491 aaPredicted RBP13.09□□□□□ -0.31
SNX6-207ENST00000556303 SIPA1Q96FS4 1042 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 PPP1R13BQ96KQ4 1090 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 BTN2A3PQ96KV6 586 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 TMEM245Q9H330 911 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 SMOC1Q9H4F8 434 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 SIX2Q9NPC8 291 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 LMBRD1Q9NUN5 540 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.09□□□□□ -0.312e-7■■□□□ 12.7
SNX6-207ENST00000556303 SUSD2Q9UGT4 822 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 SUN2Q9UH99 717 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 CYTH4Q9UIA0 394 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 GGA2Q9UJY4 613 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 NAALADL1Q9UQQ1 740 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 RAD54BQ9Y620 910 aa13.09□□□□□ -0.31
SNX6-207ENST00000556303 ASCC3Q8N3C0 2202 aaKnown RBP13.09□□□□□ -0.31
SNX6-207ENST00000556303 TBL1XO60907 577 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 HSF2BPO75031 334 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 TRUB2O95900 331 aaKnown RBP13.08□□□□□ -0.32
SNX6-207ENST00000556303 EPHX1P07099 455 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 SERPINF2P08697 491 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 ACADMP11310 421 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 POLR2EP19388 210 aaKnown RBP13.08□□□□□ -0.32
SNX6-207ENST00000556303 IRX4P78413 519 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 CDK17Q00537 523 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 ZBTB16Q05516 673 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 CAMK2GQ13555 558 aaPredicted RBP13.08□□□□□ -0.32
SNX6-207ENST00000556303 MS4A13Q5J8X5 152 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 MIIPQ5JXC2 388 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 WDR45BQ5MNZ6 344 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 TCEAL6Q6IPX3 200 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 CHST9Q7L1S5 443 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 TAC4Q86UU9 113 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 FAM71AQ8IYT1 594 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 C1orf131Q8NDD1 294 aaKnown RBP13.08□□□□□ -0.32
SNX6-207ENST00000556303 OR2T3Q8NH03 318 aa13.08□□□□□ -0.32
SNX6-207ENST00000556303 ENOX1Q8TC92 643 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms