RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 JCHAINP01591 159 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 ALADP13716 330 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 FASP25445 335 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 HPCAL1P37235 193 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 MAGEA10P43363 369 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-216ENST00000556083 ALDH5A1P51649 535 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-216ENST00000556083 MFSD10Q14728 455 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 KDELC2Q7Z4H8 507 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 NT5DC3Q86UY8 548 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 KRT73Q86Y46 540 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 CARNMT1Q8N4J0 409 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 KYQ8NBH2 561 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 PGM2Q96G03 612 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 DPY30Q9C005 99 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 POLR1EQ9GZS1 481 aaKnown RBP10.97□□□□□ -0.65
ACTN1-216ENST00000556083 IL22Q9GZX6 179 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-216ENST00000556083 RPL26L1Q9UNX3 145 aaKnown RBP10.97□□□□□ -0.65
ACTN1-216ENST00000556083 SYNDIG1LA6NDD5 238 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 PLSCR1O15162 318 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 RGS14O43566 566 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 RECQL5O94762 991 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-216ENST00000556083 MTA2O94776 668 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 INSRRP14616 1297 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 PSEN2P49810 448 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 ENPEPQ07075 957 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 EFEMP1Q12805 493 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 HLA-DQA1Q5Y7H0 255 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 SMYD5Q6GMV2 418 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 COLGALT1Q8NBJ5 622 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 MOSPD2Q8NHP6 518 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 ZNF606Q8WXB4 792 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 RMDN2Q96LZ7 410 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 SYNDIG1Q9H7V2 258 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 ZSCAN32Q9NX65 697 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 CACNA2D2Q9NY47 1150 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 KLHL3Q9UH77 587 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 TNFSF13BQ9Y275 285 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 COL1A2P08123 1366 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-216ENST00000556083 GCATO75600 419 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 GLI1P08151 1106 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 ARP10275 920 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 RAG1P15918 1043 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 ZNF24P17028 368 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 CXCL9Q07325 125 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 IYDQ6PHW0 289 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 ZNF662Q6ZS27 426 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 DENND5BQ6ZUT9 1274 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 PLPPR4Q7Z2D5 763 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 KIAA2013Q8IYS2 634 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 DDHD1Q8NEL9 900 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 WDR18Q9BV38 432 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 FICDQ9BVA6 458 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 KCTD5Q9NXV2 234 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 KLHL20Q9Y2M5 609 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 C2CD2Q9Y426 696 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 VWDEQ8N2E2 1590 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 CLTCQ00610 1675 aaKnown RBP10.97□□□□□ -0.65
ACTN1-216ENST00000556083 SMIM22K7EJ46 135 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 CDC16Q13042 620 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 TOP3AQ13472 1001 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-216ENST00000556083 GSTA3Q16772 222 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 SMTNL2Q2TAL5 461 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 SAMD4BQ5PRF9 694 aaKnown RBP10.97□□□□□ -0.65
ACTN1-216ENST00000556083 REXO1L1PQ8IX06 675 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 ACTL9Q8TC94 416 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 NSMCE2Q96MF7 247 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 RXFP1Q9HBX9 757 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 PRDM8Q9NQV8 689 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 C8orf4Q9NR00 106 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 BTBD7Q9P203 1132 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 SAE1Q9UBE0 346 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-216ENST00000556083 CHORDC1Q9UHD1 332 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-216ENST00000556083 TPRKBQ9Y3C4 175 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 GAKO14976 1311 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 TNS2Q63HR2 1409 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 GNG14A0A1W2PPG7 69 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 F5H423 210 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-216ENST00000556083 CSH1P0DML2 217 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 CSH2P0DML3 217 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 EPB42P16452 691 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 GRK4P32298 578 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 BCL2L1Q07817 233 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 CNGA2Q16280 664 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 ALG11Q2TAA5 492 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 ARMC12Q5T9G4 340 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 CDC73Q6P1J9 531 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 MIB1Q86YT6 1006 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 FBXO39Q8N4B4 442 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 RDH11Q8TC12 318 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 TAS1R2Q8TE23 839 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 FAXDC2Q96IV6 333 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 CBWD1Q9BRT8 395 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 PI4K2AQ9BTU6 479 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 ATP13A1Q9HD20 1204 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 POLLQ9UGP5 575 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 CDH9Q9ULB4 789 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 WWP2O00308 870 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 CHADO15335 359 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms