RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 M0QYV0 167 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 O00370 1275 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 SART1O43290 800 aaKnown RBP7.13□□□□□ -1.27
SLIRP-204ENST00000555890 PSTPIP1O43586 416 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 SEC31AO94979 1220 aaKnown RBP7.13□□□□□ -1.27
SLIRP-204ENST00000555890 HEXIM1O94992 359 aaKnown RBP7.13□□□□□ -1.27
SLIRP-204ENST00000555890 CHRNA1P02708 482 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 CKBP12277 381 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 PAX3P23760 479 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 TNFRSF8P28908 595 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 LRPAP1P30533 357 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 CHRNA3P32297 505 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 GNL1P36915 607 aaPredicted RBP7.13□□□□□ -1.27
SLIRP-204ENST00000555890 NOVA1P51513 510 aaKnown RBP7.13□□□□□ -1.27
SLIRP-204ENST00000555890 PSMC1P62191 440 aaKnown RBP7.13□□□□□ -1.27
SLIRP-204ENST00000555890 SLC7A5Q01650 507 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 MGAT3Q09327 533 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 ODF2Q5BJF6 829 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 GLRA4Q5JXX5 417 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 BEND6Q5SZJ8 279 aaPredicted RBP7.13□□□□□ -1.27
SLIRP-204ENST00000555890 LCLAT1Q6UWP7 414 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 LRRC8DQ7L1W4 858 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 MRPL10Q7Z7H8 261 aaKnown RBP7.13□□□□□ -1.27
SLIRP-204ENST00000555890 NLRP8Q86W28 1048 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 WDTC1Q8N5D0 677 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 EIF1ADQ8N9N8 165 aaKnown RBP7.13□□□□□ -1.27
SLIRP-204ENST00000555890 C3orf20Q8ND61 904 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 APPL2Q8NEU8 664 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 OR6B3Q8NGW1 331 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 ALG3Q92685 438 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 KRT35Q92764 455 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 C18orf25Q96B23 403 aaPredicted RBP7.13□□□□□ -1.27
SLIRP-204ENST00000555890 PGBD4Q96DM1 585 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 SAMD11Q96NU1 681 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 DEPDC7Q96QD5 511 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 TWNKQ96RR1 684 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 AP1M1Q9BXS5 423 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 ERVK-5Q9HDB9 667 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 UBN1Q9NPG3 1134 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 HOMER3Q9NSC5 361 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 FAM105AQ9NUU6 356 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.13□□□□□ -1.27
SLIRP-204ENST00000555890 ZNF446Q9NWS9 450 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 GDAP2Q9NXN4 497 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 KANSL3Q9P2N6 904 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 HESX1Q9UBX0 185 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 GIT1Q9Y2X7 761 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 TDRD15B5MCY1 1934 aaKnown RBP7.13□□□□□ -1.27
SLIRP-204ENST00000555890 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 SIGLEC16A6NMB1 481 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 C5orf67F2Z3F1 127 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 GOLGA8SH3BPF8 625 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 AXIN1O15169 862 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 ZNF623O75123 536 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 PHF2O75151 1096 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 FBXO24O75426 580 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 SASH3O75995 380 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 GLP2RO95838 553 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 THP07101 528 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 PYGMP11217 842 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 KRT3P12035 628 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 DESP17661 470 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 DNAJB1P25685 340 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 RPL9P32969 192 aaKnown RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 TNNT3P45378 269 aaPredicted RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 GABRB2P47870 512 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 LIG3P49916 1009 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 GSCP56915 257 aaPredicted RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 GUCY2DQ02846 1103 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 CUL1Q13616 776 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 DHX34Q14147 1143 aaKnown RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 IKBKEQ14164 716 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 HADHQ16836 314 aaKnown RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 GOLGA7BQ2TAP0 167 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 C2CD6Q53TS8 623 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 SNAP47Q5SQN1 464 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 LRRC38Q5VT99 294 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 DCAF12L1Q5VU92 463 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 ARHGAP17Q68EM7 881 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 LAIR1Q6GTX8 287 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 EMBQ6PCB8 327 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 FAM43BQ6ZT52 329 aaPredicted RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 ACOT1Q86TX2 421 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 SLC13A5Q86YT5 568 aaPredicted RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 CCDC50Q8IVM0 306 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 KATNAL2Q8IYT4 538 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 RCOR2Q8IZ40 523 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 KRT222Q8N1A0 295 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 CRYBG2Q8N1P7 616 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 TOP6BLQ8N6T0 577 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 EXD1Q8NHP7 514 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 UBA3Q8TBC4 463 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 IFT81Q8WYA0 676 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 SUSD6Q92537 303 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 NKD1Q969G9 470 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 TOP1MTQ969P6 601 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 ANAPC16Q96DE5 110 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 RBM41Q96IZ5 413 aaKnown RBP7.12□□□□□ -1.27
SLIRP-204ENST00000555890 TNIP3Q96KP6 325 aa7.12□□□□□ -1.27
SLIRP-204ENST00000555890 TCF12Q99081 682 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms