RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 TOB2Q14106 344 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 TBCEQ15813 527 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 TBCCQ15814 346 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CCDC96Q2M329 555 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 RUNDC3AQ59EK9 446 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 FAM133BQ5BKY9 247 aaKnown RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 TREML2Q5T2D2 321 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 WDR93Q6P2C0 686 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 PDXDC1Q6P996 788 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 SLC22A25Q6T423 547 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CPLX4Q7Z7G2 160 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 GALNT5Q7Z7M9 940 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 RPAP2Q8IXW5 612 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 ADSSL1Q8N142 457 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 ZNF366Q8N895 744 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 OR52L2PQ8NGH6 319 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 MYCBPAPQ8TBZ2 947 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 SSH3Q8TE77 659 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 XAGE5Q8WWM1 108 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 LPIN2Q92539 896 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CUL5Q93034 780 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 SH3KBP1Q96B97 665 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 PTCD3Q96EY7 689 aaKnown RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 TRMT61AQ96FX7 289 aaKnown RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CD180Q99467 661 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 ADAM2Q99965 735 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CENPOQ9BU64 300 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 ALG8Q9BVK2 526 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CINPQ9BW66 212 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 SSBP3Q9BWW4 388 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 INTS2Q9H0H0 1204 aaKnown RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 VEZTQ9HBM0 779 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 DIAPH3Q9NSV4 1193 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 ANKEF1Q9NU02 776 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 HAUS2Q9NVX0 235 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 BEX4Q9NWD9 120 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 AURKAIP1Q9NWT8 199 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 NKIRAS2Q9NYR9 191 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 SLC25A10Q9UBX3 287 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 TBC1D29Q9UFV1 150 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CD207Q9UJ71 328 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 VPS28Q9UK41 221 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 GABRQQ9UN88 632 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 CAMK2AQ9UQM7 478 aa3.3□□□□□ -1.88
MTHFD1-212ENST00000555858 DCAF1Q9Y4B6 1507 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 ADGRA2Q96PE1 1338 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 CENPJQ9HC77 1338 aaPredicted RBP3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 CYP3A7-CYP3A51PA0A087WV96 503 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 FAM90A7PA6NKC0 464 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 FAM90A22PA8MWA6 464 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 FAM90A12PA8MX19 464 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 FAM90A23PA8MXZ1 464 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 B4DLN1 442 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 GTPBP1O00178 669 aaKnown RBP3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 GRM8O00222 908 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 ZNF213O14771 459 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 CA12O43570 354 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 AHCYL1O43865 530 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 PLOD3O60568 738 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 URI1O94763 535 aaPredicted RBP3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 NDUFA10O95299 355 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 SGPL1O95470 568 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 SLC3A2P08195 630 aaKnown RBP3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 DLDP09622 509 aaKnown RBP3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 TMIGD3P0DMS9 266 aaPredicted RBP3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 UBL4AP11441 157 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 PEPDP12955 493 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 LAMP2P13473 410 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 CYP3A7P24462 503 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 ACRV1P26436 265 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 HOXD13P35453 343 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 ARL1P40616 181 aaPredicted RBP3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 TPTEP56180 551 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 TXNL4AP83876 142 aaKnown RBP3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 E2F1Q01094 437 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 CALD1Q05682 793 aaKnown RBP3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 DEUP1Q05D60 604 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 TDGQ13569 410 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 SF3B3Q15393 1217 aaKnown RBP3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 CYP1B1Q16678 543 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 CFAP58Q5T655 872 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 DENND2CQ68D51 928 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 VWA1Q6PCB0 445 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 KIAA1324Q6UXG2 1013 aaKnown RBP3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 DPY19L3Q6ZPD9 716 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 PTCHD4Q6ZW05 846 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 ENOSF1Q7L5Y1 443 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 PXKQ7Z7A4 578 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 ADGRG6Q86SQ4 1221 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 LNX2Q8N448 690 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 SIRT6Q8N6T7 355 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 LSMEM1Q8N8F7 131 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 PNPLA1Q8N8W4 532 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 TOR1AIP2Q8NFQ8 470 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 RFWD2Q8NHY2 731 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 ETNPPLQ8TBG4 499 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 FEZF2Q8TBJ5 459 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 METTL6Q8TCB7 284 aa3.29□□□□□ -1.88
MTHFD1-212ENST00000555858 KCNG4Q8TDN1 519 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms