RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 ABCA7Q8IZY2 2146 aa19.13■□□□□ 0.65
NEDD1-208ENST00000555806 DCHS1Q96JQ0 3298 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 IRAK2O43187 625 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 SYNCRIPO60506 623 aaKnown RBP19.12■□□□□ 0.65
NEDD1-208ENST00000555806 TRUB2O95900 331 aaKnown RBP19.12■□□□□ 0.65
NEDD1-208ENST00000555806 ZNF234Q14588 700 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 TAF5Q15542 800 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 NADSYN1Q6IA69 706 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 OR6B2Q6IFH4 312 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 TCEAL6Q6IPX3 200 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 DPY19L2P1Q6NXN4 242 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 CHST9Q7L1S5 443 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 FAM71AQ8IYT1 594 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 HJURPQ8NCD3 748 aaPredicted RBP19.12■□□□□ 0.65
NEDD1-208ENST00000555806 TCEAL3Q969E4 200 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 SLC39A13Q96H72 371 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 SLC6A17Q9H1V8 727 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 VPS16Q9H269 839 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 SYNCQ9H7C4 482 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 FAM204AQ9H8W3 233 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 CD248Q9HCU0 757 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 PLCB1Q9NQ66 1216 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 ABCB8Q9NUT2 735 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 ANO10Q9NW15 660 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 GGA2Q9UJY4 613 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 CYP8B1Q9UNU6 501 aa19.12■□□□□ 0.65
NEDD1-208ENST00000555806 DCDC2BA2VCK2 349 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 SLC30A4O14863 429 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 TIMM44O43615 452 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 ZNF217O75362 1048 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 GRAP2O75791 330 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 MBD3O95983 291 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 PABPC1P11940 636 aaKnown RBP19.11■□□□□ 0.65
NEDD1-208ENST00000555806 SNX16P57768 344 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 RPL6Q02878 288 aaKnown RBP19.11■□□□□ 0.65
NEDD1-208ENST00000555806 FUT11Q495W5 492 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 DCAF6Q58WW2 860 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 EFHC1Q5JVL4 640 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 MPP7Q5T2T1 576 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 TMEM215Q68D42 235 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 SERPINA13PQ6UXR4 307 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 SLC36A4Q6YBV0 504 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 C11orf57Q6ZUT1 292 aaPredicted RBP19.11■□□□□ 0.65
NEDD1-208ENST00000555806 FAM183BPQ6ZVS7 135 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 AHI1Q8N157 1196 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 PIGKQ92643 395 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 MRGPRX1Q96LB2 322 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 IRX2Q9BZI1 471 aaPredicted RBP19.11■□□□□ 0.65
NEDD1-208ENST00000555806 NUCKS1Q9H1E3 243 aaKnown RBP19.11■□□□□ 0.65
NEDD1-208ENST00000555806 RXFP3Q9NSD7 469 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 PLXND1Q9Y4D7 1925 aa19.11■□□□□ 0.65
NEDD1-208ENST00000555806 SYNJ2BP-COX16A0A087WUM0 186 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 AP5Z1O43299 807 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 HSF2BPO75031 334 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 ERBB2P04626 1255 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 GLI1P08151 1106 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 UCHL3P15374 230 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 PRKCHP24723 683 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 PTGER3P43115 390 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 PITX1P78337 314 aaPredicted RBP19.1■□□□□ 0.65
NEDD1-208ENST00000555806 CDK17Q00537 523 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 ENPP2Q13822 863 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 KRT31Q15323 416 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 STX1AQ16623 288 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 PTPN20Q4JDL3 420 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 FNDC3BQ53EP0 1204 aaKnown RBP19.1■□□□□ 0.65
NEDD1-208ENST00000555806 ZC3H12AQ5D1E8 599 aaKnown RBP19.1■□□□□ 0.65
NEDD1-208ENST00000555806 CDKAL1Q5VV42 579 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 CHSY1Q86X52 802 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 MFN1Q8IWA4 741 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 CCDC117Q8IWD4 279 aaPredicted RBP19.1■□□□□ 0.65
NEDD1-208ENST00000555806 DEFB106AQ8N104 65 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 DEFB119Q8N690 84 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.1■□□□□ 0.65
NEDD1-208ENST00000555806 ZNF557Q8N988 423 aaPredicted RBP19.1■□□□□ 0.65
NEDD1-208ENST00000555806 WFDC5Q8TCV5 224 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 CYB5D2Q8WUJ1 264 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 PRICKLE1Q96MT3 831 aaPredicted RBP19.1■□□□□ 0.65
NEDD1-208ENST00000555806 ASNSD1Q9NWL6 643 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 COX16Q9P0S2 106 aa19.1■□□□□ 0.65
NEDD1-208ENST00000555806 NUP205Q92621 2012 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 IGHV1OR15-9A0A0B4J2B8 117 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 EPHX1P07099 455 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 CYP11B1P15538 503 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 CD70P32970 193 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 RPS24P62847 133 aaKnown RBP19.09■□□□□ 0.65
NEDD1-208ENST00000555806 MS4A13Q5J8X5 152 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 FKBP15Q5T1M5 1219 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 CCDC183Q5T5S1 534 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 TAF3Q5VWG9 929 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 LYSMD4Q5XG99 296 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 MBLAC2Q68D91 279 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 IL31Q6EBC2 164 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 CARNMT1Q8N4J0 409 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 ATP6V0D2Q8N8Y2 350 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 TMEM35BQ8NCS4 154 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 RNF34Q969K3 372 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 SLC2A13Q96QE2 648 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 EDEM2Q9BV94 578 aa19.09■□□□□ 0.65
NEDD1-208ENST00000555806 PRDM16Q9HAZ2 1276 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms