RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 CDK7P50613 346 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 CACNA2D1P54289 1103 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 PNLIPRP1P54315 467 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 PSG6Q00889 435 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 KLF10Q13118 480 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 DNASE1L3Q13609 305 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 FHL2Q14192 279 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 CSHL1Q14406 222 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 GRM4Q14833 912 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 TMEM196Q5HYL7 178 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 DENND2CQ68D51 928 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 MSANTD2Q6P1R3 559 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 LDHAL6AQ6ZMR3 332 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 PIK3AP1Q6ZUJ8 805 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 TTC30AQ86WT1 665 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 SLC44A2Q8IWA5 706 aaPredicted RBP3.87□□□□□ -1.79
SRP54-209ENST00000555746 GALNT15Q8N3T1 639 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 LINC01465Q8N7H1 131 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 NGDNQ8NEJ9 315 aaKnown RBP3.87□□□□□ -1.79
SRP54-209ENST00000555746 OR1N1Q8NGS0 311 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 CAGE1Q8TC20 777 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 WDR60Q8WVS4 1066 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 RTKNQ9BST9 563 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 DDX23Q9BUQ8 820 aaKnown RBP3.87□□□□□ -1.79
SRP54-209ENST00000555746 PABPC3Q9H361 631 aaKnown RBP3.87□□□□□ -1.79
SRP54-209ENST00000555746 PRDM8Q9NQV8 689 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 GAR1Q9NY12 217 aaKnown RBP3.87□□□□□ -1.79
SRP54-209ENST00000555746 SLC17A6Q9P2U8 582 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 MGAT4CQ9UBM8 478 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 NFU1Q9UMS0 254 aa3.87□□□□□ -1.79
SRP54-209ENST00000555746 ARHGEF17Q96PE2 2063 aaPredicted RBP3.86□□□□□ -1.79
SRP54-209ENST00000555746 QSOX1O00391 747 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 IPO5O00410 1097 aaKnown RBP3.86□□□□□ -1.79
SRP54-209ENST00000555746 CES2O00748 559 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 FCHO1O14526 889 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 FAM155BO75949 473 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 ACTL6BO94805 426 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 KLRK1P26718 216 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 PLA2G5P39877 138 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 DIO1P49895 249 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 AP2B1P63010 937 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 COL10A1Q03692 680 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 DEUP1Q05D60 604 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 LMAN2Q12907 356 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 PRKG1Q13976 671 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 POSTNQ15063 836 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 ERCC6LQ2NKX8 1250 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 C4orf46Q504U0 113 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 RNASE12Q5GAN4 147 aaKnown RBP3.86□□□□□ -1.79
SRP54-209ENST00000555746 TMEM63BQ5T3F8 832 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 SULT6B1Q6IMI4 303 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 CCDC144NLQ6NUI1 221 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 RINT1Q6NUQ1 792 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 JMJD6Q6NYC1 403 aaPredicted RBP3.86□□□□□ -1.79
SRP54-209ENST00000555746 KLHL17Q6TDP4 642 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 OLFML1Q6UWY5 402 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 TRABD2AQ86V40 505 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 CERS3Q8IU89 383 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 SIMC1Q8NDZ2 872 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 UROC1Q96N76 676 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 PAGR1Q9BTK6 254 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 SORBS1Q9BX66 1292 aaKnown RBP3.86□□□□□ -1.79
SRP54-209ENST00000555746 SCAND2PQ9GZW5 306 aaPredicted RBP3.86□□□□□ -1.79
SRP54-209ENST00000555746 EPS8L2Q9H6S3 715 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 SYNPO2LQ9H987 977 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 KCNK9Q9NPC2 374 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 SNX15Q9NRS6 342 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 SRP68Q9UHB9 627 aaKnown RBP3.86□□□□□ -1.79
SRP54-209ENST00000555746 CCNL1Q9UK58 526 aaPredicted RBP3.86□□□□□ -1.79
SRP54-209ENST00000555746 ASAP1Q9ULH1 1129 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 GPR52Q9Y2T5 361 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 TMEM2Q9UHN6 1383 aa3.86□□□□□ -1.79
SRP54-209ENST00000555746 USP32Q8NFA0 1604 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 NWD2Q9ULI1 1742 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 LOC105369274A0A096LPK9 316 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 LOC102723532A0A0G2JNH3 316 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 RPP40O75818 363 aaKnown RBP3.85□□□□□ -1.79
SRP54-209ENST00000555746 MBPP02686 304 aaPredicted RBP3.85□□□□□ -1.79
SRP54-209ENST00000555746 DHRS4L1P0CG22 281 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 DRD1P21728 446 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 MMP8P22894 467 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 CST5P28325 142 aaPredicted RBP3.85□□□□□ -1.79
SRP54-209ENST00000555746 GSTM5P46439 218 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 ARL4CP56559 192 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 TXNL4AP83876 142 aaKnown RBP3.85□□□□□ -1.79
SRP54-209ENST00000555746 FAM153CQ494X1 144 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 PCID2Q5JVF3 399 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 L1TD1Q5T7N2 865 aaKnown RBP3.85□□□□□ -1.79
SRP54-209ENST00000555746 ATPAF1Q5TC12 328 aaPredicted RBP3.85□□□□□ -1.79
SRP54-209ENST00000555746 CEP85Q6P2H3 762 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 OR4N4Q8N0Y3 316 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 C12orf76Q8N812 135 aaPredicted RBP3.85□□□□□ -1.79
SRP54-209ENST00000555746 MYRIPQ8NFW9 859 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 SCAMP5Q8TAC9 235 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 TBC1D20Q96BZ9 403 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 REPS1Q96D71 796 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 KAZALD1Q96I82 304 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 SNX18Q96RF0 628 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 DUSP26Q9BV47 211 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 MLXIPQ9HAP2 919 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms