RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 NUP62CLQ9H1M0 184 aa14.36□□□□□ -0.11
PCNX4-209ENST00000555569 PRDM16Q9HAZ2 1276 aa14.36□□□□□ -0.11
PCNX4-209ENST00000555569 CD93Q9NPY3 652 aa14.36□□□□□ -0.11
PCNX4-209ENST00000555569 TMEM9BQ9NQ34 198 aa14.36□□□□□ -0.11
PCNX4-209ENST00000555569 TMEM74BQ9NUR3 256 aa14.36□□□□□ -0.11
PCNX4-209ENST00000555569 ABCB8Q9NUT2 735 aa14.36□□□□□ -0.11
PCNX4-209ENST00000555569 DACH1Q9UI36 760 aa14.36□□□□□ -0.11
PCNX4-209ENST00000555569 PILRBQ9UKJ0 227 aa14.36□□□□□ -0.11
PCNX4-209ENST00000555569 NAALADL1Q9UQQ1 740 aa14.36□□□□□ -0.11
PCNX4-209ENST00000555569 TLR6Q9Y2C9 796 aa14.36□□□□□ -0.11
PCNX4-209ENST00000555569 ATXN2Q99700 1313 aaKnown RBP14.36□□□□□ -0.11
PCNX4-209ENST00000555569 ADAMTS9Q9P2N4 1935 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 CAPN9O14815 690 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 PAPSS1O43252 624 aaPredicted RBP14.35□□□□□ -0.11
PCNX4-209ENST00000555569 TBL1XO60907 577 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 NDUFS2O75306 463 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 PABPC1P11940 636 aaKnown RBP14.35□□□□□ -0.11
PCNX4-209ENST00000555569 PRKCHP24723 683 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 ERCC5P28715 1186 aaPredicted RBP14.35□□□□□ -0.11
PCNX4-209ENST00000555569 SLC6A4P31645 630 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 HOXD12P35452 270 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 ZNF33AQ06730 810 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 DAB2IPQ5VWQ8 1189 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 PEAR1Q5VY43 1037 aaPredicted RBP14.35□□□□□ -0.11
PCNX4-209ENST00000555569 SMYD5Q6GMV2 418 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 NADSYN1Q6IA69 706 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 SERPINA13PQ6UXR4 307 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 CHST9Q7L1S5 443 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 KIAA0907Q7Z7F0 614 aaPredicted RBP14.35□□□□□ -0.11
PCNX4-209ENST00000555569 METTL3Q86U44 580 aaKnown RBP14.35□□□□□ -0.11
PCNX4-209ENST00000555569 TAC4Q86UU9 113 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 SLC39A13Q96H72 371 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 DDX50Q9BQ39 737 aaKnown RBP14.35□□□□□ -0.11
PCNX4-209ENST00000555569 LSM14BQ9BX40 385 aaKnown RBP14.35□□□□□ -0.11
PCNX4-209ENST00000555569 MKRN2Q9H000 416 aaKnown RBP14.35□□□□□ -0.11
PCNX4-209ENST00000555569 SIX2Q9NPC8 291 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 GGA2Q9UJY4 613 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 CACNA1EQ15878 2313 aa14.35□□□□□ -0.11
PCNX4-209ENST00000555569 MUC22E2RYF6 1773 aaPredicted RBP14.34□□□□□ -0.11
PCNX4-209ENST00000555569 CDX4O14627 284 aaPredicted RBP14.34□□□□□ -0.11
PCNX4-209ENST00000555569 EPHX1P07099 455 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 PRKCSHP14314 528 aaPredicted RBP14.34□□□□□ -0.11
PCNX4-209ENST00000555569 LMAN2Q12907 356 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 PDCLQ13371 301 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 DUOXA1Q1HG43 343 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 VWA3BQ502W6 1294 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 FNDC3BQ53EP0 1204 aaKnown RBP14.34□□□□□ -0.11
PCNX4-209ENST00000555569 SYPL2Q5VXT5 272 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 SLC23A3Q6PIS1 610 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 TMPRSS6Q8IU80 811 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 SLC41A1Q8IVJ1 513 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 AHI1Q8N157 1196 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 ZNF557Q8N988 423 aaPredicted RBP14.34□□□□□ -0.11
PCNX4-209ENST00000555569 HJURPQ8NCD3 748 aaPredicted RBP14.34□□□□□ -0.11
PCNX4-209ENST00000555569 CEP76Q8TAP6 659 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 ADAM32Q8TC27 787 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 WFDC5Q8TCV5 224 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 CYB5D2Q8WUJ1 264 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 SIPA1Q96FS4 1042 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 NDST4Q9H3R1 872 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 POPDC2Q9HBU9 364 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 STIM2Q9P246 746 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 USP36Q9P275 1121 aaKnown RBP14.34□□□□□ -0.11
PCNX4-209ENST00000555569 DNAJC12Q9UKB3 198 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 AJAP1Q9UKB5 411 aaPredicted RBP14.34□□□□□ -0.11
PCNX4-209ENST00000555569 PCDHGC3Q9UN70 934 aa14.34□□□□□ -0.11
PCNX4-209ENST00000555569 NUMA1Q14980 2115 aa14.33□□□□□ -0.11
PCNX4-209ENST00000555569 ACACBO00763 2458 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 TYW5A2RUC4 315 aaKnown RBP14.33□□□□□ -0.12
PCNX4-209ENST00000555569 MOCS2O96007 188 aaPredicted RBP14.33□□□□□ -0.12
PCNX4-209ENST00000555569 APOEP02649 317 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 CFIP05156 583 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 HLA-EP13747 358 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 CD6P30203 668 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 CD70P32970 193 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 COPAP53621 1224 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 YWHAZP63104 245 aaKnown RBP14.33□□□□□ -0.12
PCNX4-209ENST00000555569 PTK2Q05397 1052 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 HSP90AA4PQ58FG1 418 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 MIIPQ5JXC2 388 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 MBLAC2Q68D91 279 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 CLEC17AQ6ZS10 378 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 RABEPKQ7Z6M1 372 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 ADIPOR2Q86V24 386 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 PASD1Q8IV76 773 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 MFN1Q8IWA4 741 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 PRCCQ92733 491 aaPredicted RBP14.33□□□□□ -0.12
PCNX4-209ENST00000555569 ZNF419Q96HQ0 510 aaPredicted RBP14.33□□□□□ -0.12
PCNX4-209ENST00000555569 HSPA12BQ96MM6 686 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 PRICKLE1Q96MT3 831 aaPredicted RBP14.33□□□□□ -0.12
PCNX4-209ENST00000555569 CPXM1Q96SM3 734 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 TUBGCP2Q9BSJ2 902 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 NUCKS1Q9H1E3 243 aaKnown RBP14.33□□□□□ -0.12
PCNX4-209ENST00000555569 ITM2CQ9NQX7 267 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 LMBRD1Q9NUN5 540 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 TJP2Q9UDY2 1190 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 SLC6A14Q9UN76 642 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 PLA2G4CQ9UP65 541 aa14.33□□□□□ -0.12
PCNX4-209ENST00000555569 KCNJ18B7U540 433 aa14.32□□□□□ -0.12
PCNX4-209ENST00000555569 FOXN3O00409 490 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms