RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 CD44P16070 742 aaKnown RBP11.32□□□□□ -0.6
TDP1-212ENST00000555565 TKTL1P51854 596 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 COG7P83436 770 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 PDE4CQ08493 712 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 EFEMP1Q12805 493 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 LRMPQ12912 555 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 GOLGA7BQ2TAP0 167 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 PM20D1Q6GTS8 502 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 ISM2Q6H9L7 571 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 BHLHA9Q7RTU4 235 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 CHPFQ8IZ52 775 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 UBR7Q8N806 425 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 CADM4Q8NFZ8 388 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 DCBLD2Q96PD2 775 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 CDK5RAP1Q96SZ6 601 aaKnown RBP11.32□□□□□ -0.6
TDP1-212ENST00000555565 GTPBP4Q9BZE4 634 aaKnown RBP11.32□□□□□ -0.6
TDP1-212ENST00000555565 MKRN2Q9H000 416 aaKnown RBP11.32□□□□□ -0.6
TDP1-212ENST00000555565 PLK2Q9NYY3 685 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 RASAL2Q9UJF2 1139 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 FBXO10Q9UK96 956 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 PTPRQQ9UMZ3 2332 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 MGAQ8IWI9 3026 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 ATMQ13315 3056 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 E9PAM4 449 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 PSMA7O14818 248 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 XPO1O14980 1071 aaKnown RBP11.31□□□□□ -0.6
TDP1-212ENST00000555565 BCAT2O15382 392 aaPredicted RBP11.31□□□□□ -0.6
TDP1-212ENST00000555565 ZBED1O96006 694 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 PENKP01210 267 aaPredicted RBP11.31□□□□□ -0.6
TDP1-212ENST00000555565 HMBSP08397 361 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 NCAM1P13591 858 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 BMP6P22004 513 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 CORO1AP31146 461 aaKnown RBP11.31□□□□□ -0.6
TDP1-212ENST00000555565 MATKP42679 507 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 DGKGP49619 791 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 SLC8A3P57103 927 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 YWHAGP61981 247 aaKnown RBP eCLIP11.31□□□□□ -0.6
TDP1-212ENST00000555565 SGO2Q562F6 1265 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 DCAF12L1Q5VU92 463 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 FYB2Q5VWT5 728 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 IL27RAQ6UWB1 636 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 ELOA2Q8IYF1 753 aaPredicted RBP11.31□□□□□ -0.6
TDP1-212ENST00000555565 ARHGAP18Q8N392 663 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 NDRG1Q92597 394 aaKnown RBP11.31□□□□□ -0.6
TDP1-212ENST00000555565 GPR174Q9BXC1 333 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 ULBP1Q9BZM6 244 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 MARCH2Q9P0N8 246 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 HOOK1Q9UJC3 728 aaKnown RBP11.31□□□□□ -0.6
TDP1-212ENST00000555565 MAN1B1Q9UKM7 699 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 TSPAN16Q9UKR8 245 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 AGO1Q9UL18 857 aaKnown RBP11.31□□□□□ -0.6
TDP1-212ENST00000555565 ZNF510Q9Y2H8 683 aa11.31□□□□□ -0.6
TDP1-212ENST00000555565 MYO18BQ8IUG5 2567 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 KNTC1P50748 2209 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 CABIN1Q9Y6J0 2220 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 GOLGA8CPA6NN73 597 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 O00370 1275 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 PLK4O00444 970 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 GFRA2O00451 464 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 TNFSF14O43557 240 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 CER1O95813 267 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 IGLV3-19P01714 112 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 CD19P15391 556 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 CHKAP35790 457 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 FMO5P49326 533 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 TPMTP51580 245 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 BCAT1P54687 386 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 BST2Q10589 180 aaKnown RBP11.3□□□□□ -0.6
TDP1-212ENST00000555565 STIM1Q13586 685 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 ENPP2Q13822 863 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 KIF19Q2TAC6 998 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 FUT11Q495W5 492 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 PKDCCQ504Y2 493 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 SDE2Q6IQ49 451 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 TTI2Q6NXR4 508 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 DHRS13Q6UX07 377 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 RSRC2Q7L4I2 434 aaKnown RBP11.3□□□□□ -0.6
TDP1-212ENST00000555565 DENND1CQ8IV53 801 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 UBA3Q8TBC4 463 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 DHTKD1Q96HY7 919 aaPredicted RBP11.3□□□□□ -0.6
TDP1-212ENST00000555565 CEP63Q96MT8 703 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 DCLK3Q9C098 648 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 MIR1-1HGQ9H1L0 117 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 METTL14Q9HCE5 456 aaKnown RBP11.3□□□□□ -0.6
TDP1-212ENST00000555565 HESX1Q9UBX0 185 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 EIF2B4Q9UI10 523 aaKnown RBP11.3□□□□□ -0.6
TDP1-212ENST00000555565 STRIP2Q9ULQ0 834 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.3□□□□□ -0.6
TDP1-212ENST00000555565 SLC27A6Q9Y2P4 619 aa11.3□□□□□ -0.6
TDP1-212ENST00000555565 A0A1B0GVT2 93 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 SLC12A8A0AV02 714 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 YJEFN3A6XGL0 299 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 MEI4A8MW99 385 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 PPP1R3GB7ZBB8 358 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 E7ENQ6 273 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 PMM2O15305 246 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 ZBTB24O43167 697 aaPredicted RBP11.29□□□□□ -0.6
TDP1-212ENST00000555565 GABBR2O75899 941 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 VDRP11473 427 aa11.29□□□□□ -0.6
TDP1-212ENST00000555565 HLA-EP13747 358 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms