RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ELOVL1Q9BW60 279 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 GGA3Q9NZ52 723 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 DNAJC16Q9Y2G8 782 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 PCDHA10Q9Y5I2 948 aa6.07□□□□□ -1.44
CKS1BP1-201ENST00000555221 SPATA31A1Q5TZJ5 1347 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 CYP3A7-CYP3A51PA0A087WV96 503 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 AGAP5A6NIR3 686 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 H7C1Q1 480 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 EYA2O00167 538 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 ZNF213O14771 459 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 FOXN1O15353 648 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 CYP21A2P08686 494 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 CYP3A7P24462 503 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 SLC8A1P32418 973 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 CACNA2D1P54289 1103 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 WDR5P61964 334 aaKnown RBP6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 HOXA4Q00056 320 aaPredicted RBP6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 CNGA3Q16281 694 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 LCE3BQ5TA77 95 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 TMEM88Q6PEY1 159 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 VSTM1Q6UX27 236 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 AMER2Q8N7J2 671 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 ADPRHL1Q8NDY3 354 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 AKAP1Q92667 903 aaKnown RBP eCLIP6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 MPP4Q96JB8 637 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 FYTTD1Q96QD9 318 aaKnown RBP6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 SEC62Q99442 399 aaKnown RBP6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 TIMP4Q99727 224 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 NPAS1Q99742 590 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 PLEKHA2Q9HB19 425 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 TMEM160Q9NX00 188 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 IFT80Q9P2H3 777 aaPredicted RBP6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 TMEM98Q9Y2Y6 226 aa6.06□□□□□ -1.44
CKS1BP1-201ENST00000555221 BTBD19C9JJ37 291 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 H3BNC9 293 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 STX16-NPEPL1H3BU86 382 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 STX16O14662 325 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 FYB1O15117 783 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 EPB41L2O43491 1005 aaKnown RBP6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 JTBO76095 146 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 HNRNPCP07910 306 aaKnown RBP eCLIP6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 C6P13671 934 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 TNNT1P13805 278 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 IGFBP2P18065 325 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 WT1P19544 449 aaPredicted RBP6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 PLA2G5P39877 138 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 PNPLA4P41247 253 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 KCNB1Q14721 858 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 MFSD13AQ14CX5 517 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 DLGAP5Q15398 846 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 SLC4A8Q2Y0W8 1093 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 GLE1Q53GS7 698 aaKnown RBP6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 ZNF484Q5JVG2 852 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 TMEM65Q6PI78 240 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 SYNE3Q6ZMZ3 975 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 DCDC5Q6ZRR9 648 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 LAS2Q8IYD9 372 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 ANKRD44Q8N8A2 993 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 KAZALD1Q96I82 304 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 HIC2Q96JB3 615 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 UROC1Q96N76 676 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 REEP2Q9BRK0 252 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 DUSP26Q9BV47 211 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 UNC45AQ9H3U1 944 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 PDE11AQ9HCR9 933 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 SEMA5BQ9P283 1151 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 HS3ST3A1Q9Y663 406 aa6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 COPG1Q9Y678 874 aaKnown RBP6.05□□□□□ -1.44
CKS1BP1-201ENST00000555221 PRRT4C9JH25 899 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 J3KRW8 73 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 CLIC1O00299 241 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 GCATO75600 419 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 KRT4P19013 534 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 AGTR2P50052 363 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 CCR5P51681 352 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 KRTAP10-2P60368 255 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 MAPK7Q13164 816 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 LARS2Q15031 903 aaKnown RBP6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 AKNAD1Q5T1N1 836 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 SERPINA13PQ6UXR4 307 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 KYAT3Q6YP21 454 aaKnown RBP6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 SLC39A5Q6ZMH5 540 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 ARRDC3Q96B67 414 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 CCDC17Q96LX7 622 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 MACROD1Q9BQ69 325 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 UBN1Q9NPG3 1134 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 ASIC5Q9NY37 505 aa6.04□□□□□ -1.44
CKS1BP1-201ENST00000555221 A0A087X1B8 175 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 VWA3AA6NCI4 1184 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 HMGB1P1B2RPK0 211 aaPredicted RBP6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 TISP43B9A030 160 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 MGST3O14880 152 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 RAMP2O60895 175 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 CHN1P15882 459 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 NDUFS1P28331 727 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 DDX10Q13206 875 aaKnown RBP6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 G3BP1Q13283 466 aaKnown RBP eCLIP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms