RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 GRIK1P39086 918 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 SEMA5AQ13591 1074 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 DDR2Q16832 855 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 EFHC2Q5JST6 749 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 BRMS1LQ5PSV4 323 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 CAND1Q86VP6 1230 aaKnown RBP9.2□□□□□ -0.94
TDP1-210ENST00000554976 TDRPQ86YL5 185 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 IGDCC3Q8IVU1 814 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 FCRL2Q96LA5 508 aaPredicted RBP9.2□□□□□ -0.94
TDP1-210ENST00000554976 HAPLN3Q96S86 360 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 RUFY1Q96T51 708 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 DNAJC17Q9NVM6 304 aaKnown RBP9.2□□□□□ -0.94
TDP1-210ENST00000554976 PAK5Q9P286 719 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 HEY1Q9Y5J3 304 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 BACE2Q9Y5Z0 518 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 TEX264Q9Y6I9 313 aa9.2□□□□□ -0.94
TDP1-210ENST00000554976 GBF1Q92538 1859 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 NT5C1B-RDH14C9J2C7 533 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 EEF2KO00418 725 aaKnown RBP9.19□□□□□ -0.94
TDP1-210ENST00000554976 MAP3K6O95382 1288 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 TPSB2P20231 275 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 GALNT2Q10471 571 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 SMARCB1Q12824 385 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 PPP2R5DQ14738 602 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 RASA2Q15283 850 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 TPSAB1Q15661 275 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 CEP128Q6ZU80 1094 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 ZNF276Q8N554 614 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.19□□□□□ -0.94
TDP1-210ENST00000554976 IGSF21Q96ID5 467 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 SERPINB12Q96P63 405 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 TKTL2Q9H0I9 626 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 C11orf49Q9H6J7 331 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 ABI2Q9NYB9 513 aaPredicted RBP9.19□□□□□ -0.94
TDP1-210ENST00000554976 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.19□□□□□ -0.94
TDP1-210ENST00000554976 FETUBQ9UGM5 382 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 LRFN2Q9ULH4 789 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 WDR27A2RRH5 827 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 TIMP1P01033 207 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 TSHRP16473 764 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 ERCC2P18074 760 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 NR1D1P20393 614 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 ARL4AP40617 200 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 MMP13P45452 471 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 PPIDQ08752 370 aaKnown RBP9.19□□□□□ -0.94
TDP1-210ENST00000554976 ELAVL2Q12926 359 aaKnown RBP9.19□□□□□ -0.94
TDP1-210ENST00000554976 SDHAF4Q5VUM1 108 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 SNX30Q5VWJ9 437 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 C4orf22Q6V702 233 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 DEFB128Q7Z7B8 93 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 ABI1Q8IZP0 508 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 GOLGA6L1Q8N7Z2 621 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 MCUQ8NE86 351 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 MZB1Q8WU39 189 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 CEP295NLQ96MC4 621 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 TTPALQ9BTX7 342 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 HERC2P3Q9BVR0 1158 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 HSFX1Q9UBD0 423 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 ZNF212Q9UDV6 495 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 XPO7Q9UIA9 1087 aaKnown RBP9.19□□□□□ -0.94
TDP1-210ENST00000554976 NR2E3Q9Y5X4 410 aa9.19□□□□□ -0.94
TDP1-210ENST00000554976 MTCL1Q9Y4B5 1905 aaKnown RBP9.18□□□□□ -0.94
TDP1-210ENST00000554976 WASH4PA8MWX3 477 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 CAPN9O14815 690 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 CACNG3O60359 315 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 LRIG2O94898 1065 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 ABLIM3O94929 683 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 ACSL3O95573 720 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 AGTP01019 485 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 IFNB1P01574 187 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 HTR7P34969 479 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 IFI35P80217 286 aaPredicted RBP9.18□□□□□ -0.94
TDP1-210ENST00000554976 DEFB103AP81534 67 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 PRSS55Q6UWB4 352 aaPredicted RBP9.18□□□□□ -0.94
TDP1-210ENST00000554976 ANKS3Q6ZW76 656 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 CCDC25Q86WR0 208 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 ARHGAP12Q8IWW6 846 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 CYP4X1Q8N118 509 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 SLC39A11Q8N1S5 342 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 ATAD1Q8NBU5 361 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 SPPL2BQ8TCT7 592 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 TFB1MQ8WVM0 346 aaKnown RBP9.18□□□□□ -0.94
TDP1-210ENST00000554976 HTR3CQ8WXA8 447 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 HDAC11Q96DB2 347 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 ZNF419Q96HQ0 510 aaPredicted RBP9.18□□□□□ -0.94
TDP1-210ENST00000554976 C9orf72Q96LT7 481 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 TTC25Q96NG3 672 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 LGMNQ99538 433 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 PRMT1Q99873 361 aaKnown RBP9.18□□□□□ -0.94
TDP1-210ENST00000554976 WDCPQ9H6R7 721 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 SAYSD1Q9NPB0 183 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 EIF2B3Q9NR50 452 aaKnown RBP9.18□□□□□ -0.94
TDP1-210ENST00000554976 CLIC5Q9NZA1 410 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 RABGEF1Q9UJ41 708 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 TLR6Q9Y2C9 796 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 SYNJ2BP-COX16A0A087WUM0 186 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 H7C0C1 242 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 H7C4K7 107 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 SOAT2O75908 522 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 ATP5OP48047 213 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms