RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ELMSAN1Q6PJG2 1045 aa18.02■□□□□ 0.47
SHOX-204ENST00000554971 GRASPQ7Z6J2 395 aaPredicted RBP18.02■□□□□ 0.47
SHOX-204ENST00000554971 HS6ST3Q8IZP7 471 aa18.02■□□□□ 0.47
SHOX-204ENST00000554971 SCAMP5Q8TAC9 235 aa18.02■□□□□ 0.47
SHOX-204ENST00000554971 CCDC114Q96M63 670 aa18.02■□□□□ 0.47
SHOX-204ENST00000554971 ZNF317Q96PQ6 595 aaPredicted RBP18.02■□□□□ 0.47
SHOX-204ENST00000554971 LHX5Q9H2C1 402 aa18.02■□□□□ 0.47
SHOX-204ENST00000554971 ZNF334Q9HCZ1 680 aaPredicted RBP18.02■□□□□ 0.47
SHOX-204ENST00000554971 INTS9Q9NV88 658 aaKnown RBP18.02■□□□□ 0.47
SHOX-204ENST00000554971 M0QYV0 167 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 MED7O43513 233 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 GABBR2O75899 941 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 GPD2P43304 727 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 BCAT1P54687 386 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 EPHB3P54753 998 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 RPL10AP62906 217 aaKnown RBP18.01■□□□□ 0.47
SHOX-204ENST00000554971 SLC5A9Q2M3M2 681 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 DENND1BQ6P3S1 775 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 DNAJC24Q6P3W2 148 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 POTEHQ6S545 545 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 CCDC121Q6ZUS5 278 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 POLNQ7Z5Q5 900 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 WDTC1Q8N5D0 677 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 SLC35F5Q8WV83 523 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 ATXN2LQ8WWM7 1075 aaKnown RBP18.01■□□□□ 0.47
SHOX-204ENST00000554971 DNAI2Q9GZS0 605 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 USP15Q9Y4E8 981 aaPredicted RBP18.01■□□□□ 0.47
SHOX-204ENST00000554971 ACTL7BQ9Y614 415 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 MYO10Q9HD67 2058 aa18.01■□□□□ 0.47
SHOX-204ENST00000554971 SLC38A8A6NNN8 435 aa18■□□□□ 0.47
SHOX-204ENST00000554971 ABHD2P08910 425 aa18■□□□□ 0.47
SHOX-204ENST00000554971 SLC5A3P53794 718 aa18■□□□□ 0.47
SHOX-204ENST00000554971 IFI35P80217 286 aaPredicted RBP18■□□□□ 0.47
SHOX-204ENST00000554971 BST2Q10589 180 aaKnown RBP18■□□□□ 0.47
SHOX-204ENST00000554971 PLD1Q13393 1074 aa18■□□□□ 0.47
SHOX-204ENST00000554971 STAT4Q14765 748 aa18■□□□□ 0.47
SHOX-204ENST00000554971 STILQ15468 1287 aa18■□□□□ 0.47
SHOX-204ENST00000554971 PMF1Q6P1K2 205 aa18■□□□□ 0.47
SHOX-204ENST00000554971 DENND5BQ6ZUT9 1274 aa18■□□□□ 0.47
SHOX-204ENST00000554971 TMEM150AQ86TG1 271 aa18■□□□□ 0.47
SHOX-204ENST00000554971 PIGZQ86VD9 579 aa18■□□□□ 0.47
SHOX-204ENST00000554971 CCDC25Q86WR0 208 aa18■□□□□ 0.47
SHOX-204ENST00000554971 PASD1Q8IV76 773 aa18■□□□□ 0.47
SHOX-204ENST00000554971 RIBC1Q8N443 379 aaPredicted RBP18■□□□□ 0.47
SHOX-204ENST00000554971 ANKS4BQ8N8V4 417 aa18■□□□□ 0.47
SHOX-204ENST00000554971 CORO1BQ9BR76 489 aa18■□□□□ 0.47
SHOX-204ENST00000554971 NSRP1Q9H0G5 558 aaKnown RBP18■□□□□ 0.47
SHOX-204ENST00000554971 IL21Q9HBE4 155 aa18■□□□□ 0.47
SHOX-204ENST00000554971 ANKRD65E5RJM6 399 aa18■□□□□ 0.47
SHOX-204ENST00000554971 MBTPS2O43462 519 aa18■□□□□ 0.47
SHOX-204ENST00000554971 XYLBO75191 536 aa18■□□□□ 0.47
SHOX-204ENST00000554971 RHOP08100 348 aa18■□□□□ 0.47
SHOX-204ENST00000554971 EPHA5P54756 1037 aa18■□□□□ 0.47
SHOX-204ENST00000554971 GSCP56915 257 aaPredicted RBP18■□□□□ 0.47
SHOX-204ENST00000554971 IFT88Q13099 833 aa18■□□□□ 0.47
SHOX-204ENST00000554971 ITIH4Q14624 930 aa18■□□□□ 0.47
SHOX-204ENST00000554971 LEXMQ3ZCV2 418 aa18■□□□□ 0.47
SHOX-204ENST00000554971 LACTB2Q53H82 288 aaPredicted RBP18■□□□□ 0.47
SHOX-204ENST00000554971 PPP1R15BQ5SWA1 713 aa18■□□□□ 0.47
SHOX-204ENST00000554971 GAREM2Q75VX8 874 aa18■□□□□ 0.47
SHOX-204ENST00000554971 EPS8L3Q8TE67 593 aaKnown RBP18■□□□□ 0.47
SHOX-204ENST00000554971 FNIP1Q8TF40 1166 aa18■□□□□ 0.47
SHOX-204ENST00000554971 ATG4AQ8WYN0 398 aa18■□□□□ 0.47
SHOX-204ENST00000554971 TCEAL4Q96EI5 215 aa18■□□□□ 0.47
SHOX-204ENST00000554971 MYRFLQ96LU7 910 aa18■□□□□ 0.47
SHOX-204ENST00000554971 SLITRK1Q96PX8 696 aa18■□□□□ 0.47
SHOX-204ENST00000554971 SELENOSQ9BQE4 189 aa18■□□□□ 0.47
SHOX-204ENST00000554971 KDM4CQ9H3R0 1056 aa18■□□□□ 0.47
SHOX-204ENST00000554971 POMKQ9H5K3 350 aa18■□□□□ 0.47
SHOX-204ENST00000554971 PPCSQ9HAB8 311 aa18■□□□□ 0.47
SHOX-204ENST00000554971 LRRC4CQ9HCJ2 640 aa18■□□□□ 0.47
SHOX-204ENST00000554971 IL37Q9NZH6 218 aa18■□□□□ 0.47
SHOX-204ENST00000554971 WDR35Q9P2L0 1181 aa18■□□□□ 0.47
SHOX-204ENST00000554971 LGALS13Q9UHV8 139 aa18■□□□□ 0.47
SHOX-204ENST00000554971 R3HDM2Q9Y2K5 976 aaKnown RBP18■□□□□ 0.47
SHOX-204ENST00000554971 ASB3Q9Y575 518 aa18■□□□□ 0.47
SHOX-204ENST00000554971 XPO1O14980 1071 aaKnown RBP17.99■□□□□ 0.47
SHOX-204ENST00000554971 LIG3P49916 1009 aa17.99■□□□□ 0.47
SHOX-204ENST00000554971 ACTN3Q08043 901 aaPredicted RBP17.99■□□□□ 0.47
SHOX-204ENST00000554971 CES5AQ6NT32 575 aa17.99■□□□□ 0.47
SHOX-204ENST00000554971 HIBCHQ6NVY1 386 aaPredicted RBP17.99■□□□□ 0.47
SHOX-204ENST00000554971 DCUN1D2Q6PH85 259 aa17.99■□□□□ 0.47
SHOX-204ENST00000554971 ERICH1Q86X53 443 aa17.99■□□□□ 0.47
SHOX-204ENST00000554971 ZCCHC9Q8N567 271 aaKnown RBP17.99■□□□□ 0.47
SHOX-204ENST00000554971 ZNF512Q96ME7 567 aaPredicted RBP17.99■□□□□ 0.47
SHOX-204ENST00000554971 TTC25Q96NG3 672 aa17.99■□□□□ 0.47
SHOX-204ENST00000554971 HERPUD2Q9BSE4 406 aa17.99■□□□□ 0.47
SHOX-204ENST00000554971 WDR6Q9NNW5 1121 aaKnown RBP17.99■□□□□ 0.47
SHOX-204ENST00000554971 PNPLA8Q9NP80 782 aa17.99■□□□□ 0.47
SHOX-204ENST00000554971 HESX1Q9UBX0 185 aa17.99■□□□□ 0.47
SHOX-204ENST00000554971 MAGED2Q9UNF1 606 aaPredicted RBP17.99■□□□□ 0.47
SHOX-204ENST00000554971 LIASO43766 372 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 MOSPD3O75425 235 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 CSH1P0DML2 217 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 CSH2P0DML3 217 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 PTPN2P17706 415 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 PGFP49763 221 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 NR1H3Q13133 447 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 SMAD4Q13485 552 aaKnown RBP17.98■□□□□ 0.47
SHOX-204ENST00000554971 PABPC1LQ4VXU2 614 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms