RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 BRAFP15056 766 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 GJA8P48165 433 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 MRPS5P82675 430 aaKnown RBP17.07■□□□□ 0.32
PCNX1-209ENST00000554879 UBXN11Q5T124 520 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 GALNT15Q8N3T1 639 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 LINC01465Q8N7H1 131 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 FNDC3AQ9Y2H6 1198 aaKnown RBP17.07■□□□□ 0.32
PCNX1-209ENST00000554879 C2CD4BA6NLJ0 364 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 APOC4-APOC2K7ER74 178 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 KCNK1O00180 336 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 APOC2P02655 101 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 CYP3A5P20815 502 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 CHKAP35790 457 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 INCA1Q0VD86 236 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 ACAP1Q15027 740 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 KCTD21Q4G0X4 260 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 DENND5BQ6ZUT9 1274 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 ECHDC2Q86YB7 292 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 PPIL6Q8IXY8 311 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 TSNARE1Q96NA8 513 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 SPON2Q9BUD6 331 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 GOT1P17174 413 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 STIP1P31948 543 aaKnown RBP17.06■□□□□ 0.32
PCNX1-209ENST00000554879 NOS2P35228 1153 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 CDKN2BP42772 138 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 XRCC4Q13426 336 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 PRPSAP1Q14558 356 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 DCLRE1AQ6PJP8 1040 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 ATP11CQ8NB49 1132 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 ATAD1Q8NBU5 361 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 GIPC2Q8TF65 315 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 PAK5Q9P286 719 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 PIRO00625 290 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 PRRG1O14668 218 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 SHBGP04278 402 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 LINGO3P0C6S8 592 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 NFE2Q16621 373 aaPredicted RBP17.06■□□□□ 0.32
PCNX1-209ENST00000554879 SPRED3Q2MJR0 410 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 POLNQ7Z5Q5 900 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 SBF1O95248 1867 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 ATP9BO43861 1147 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 RAG1P15918 1043 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 IRX4P78413 519 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 PDE1BQ01064 536 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 KCNT2Q6UVM3 1135 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 ISLR2Q6UXK2 745 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 ZNF572Q7Z3I7 529 aaPredicted RBP17.06■□□□□ 0.32
PCNX1-209ENST00000554879 BHMTQ93088 406 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 MCRS1Q96EZ8 462 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 RNF157Q96PX1 679 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 KLF6Q99612 283 aaPredicted RBP17.06■□□□□ 0.32
PCNX1-209ENST00000554879 NENFQ9UMX5 172 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 CNTN6Q9UQ52 1028 aa17.06■□□□□ 0.32
PCNX1-209ENST00000554879 FAM155AB1AL88 458 aaPredicted RBP17.05■□□□□ 0.32
PCNX1-209ENST00000554879 MT-ND3P03897 115 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 MATKP42679 507 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 NRLP54845 237 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 PTK6Q13882 451 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 LRIG3Q6UXM1 1119 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 UNC45BQ8IWX7 931 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 PYROXD2Q8N2H3 581 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 TFB1MQ8WVM0 346 aaKnown RBP17.05■□□□□ 0.32
PCNX1-209ENST00000554879 NR1H4Q96RI1 486 aaPredicted RBP17.05■□□□□ 0.32
PCNX1-209ENST00000554879 TTC1Q99614 292 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 BANF1O75531 89 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 ZNF844Q08AG5 666 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 RAB6CQ53S08 254 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 BBS12Q6ZW61 710 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 ST13P4Q8IZP2 240 aaPredicted RBP17.05■□□□□ 0.32
PCNX1-209ENST00000554879 CD101Q93033 1021 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 TTC25Q96NG3 672 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 YIPF2Q9BWQ6 316 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 TKTL2Q9H0I9 626 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 RAB6CQ9H0N0 254 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 TMEM59LQ9UK28 342 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 MGRN1O60291 552 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 CYP2C18P33260 490 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 PCDH9Q9HC56 1237 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 TRPC7Q9HCX4 862 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 TXLNGQ9NUQ3 528 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 ARVCFO00192 962 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 LPXNO60711 386 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 IRF1P10914 325 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 TKTP29401 623 aaKnown RBP17.05■□□□□ 0.32
PCNX1-209ENST00000554879 SERPINB6P35237 376 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 C4orf33Q8N1A6 199 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 DDX18Q9NVP1 670 aaKnown RBP17.05■□□□□ 0.32
PCNX1-209ENST00000554879 PCDHB5Q9Y5E4 795 aa17.05■□□□□ 0.32
PCNX1-209ENST00000554879 BTKQ06187 659 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 PDK1Q15118 436 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 CA9Q16790 459 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 PIP4K2CQ8TBX8 421 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 PABPC5Q96DU9 382 aaKnown RBP17.04■□□□□ 0.32
PCNX1-209ENST00000554879 PLEKHG4BQ96PX9 1271 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 HNRNPABQ99729 332 aaKnown RBP17.04■□□□□ 0.32
PCNX1-209ENST00000554879 PCDH18Q9HCL0 1135 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 DNALI1O14645 258 aaPredicted RBP17.04■□□□□ 0.32
PCNX1-209ENST00000554879 USP46P62068 366 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 MTA1Q13330 715 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 MTFR1Q15390 333 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms