RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 FYNP06241 537 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 GLI1P08151 1106 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 GABRG2P18507 467 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 GBP1P32455 592 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 MPLP40238 635 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 USP8P40818 1118 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 LIMK1P53667 647 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 TBX4P57082 545 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 SNX16P57768 344 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 BPIFB4P59827 614 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 KCNJ12Q14500 433 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 GEN1Q17RS7 908 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 TCP11X2Q5H9J9 407 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 FAM71AQ8IYT1 594 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 GPT2Q8TD30 523 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 DQX1Q8TE96 717 aaKnown RBP10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 WFIKKN2Q8TEU8 576 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 IPO4Q8TEX9 1081 aaKnown RBP10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 HMGB4Q8WW32 186 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 FAM149B1Q96BN6 582 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 NOX5Q96PH1 765 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 DDX50Q9BQ39 737 aaKnown RBP10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 RTKNQ9BST9 563 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 LHX5Q9H2C1 402 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 POPDC2Q9HBU9 364 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 ZDHHC4Q9NPG8 344 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 ACP6Q9NPH0 428 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 ASNSD1Q9NWL6 643 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 THAP10Q9P2Z0 257 aaPredicted RBP10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 CYTH4Q9UIA0 394 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 DNAJC12Q9UKB3 198 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 GON4LQ3T8J9 2241 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 SPTBN2O15020 2390 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 CAPN9O14815 690 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 ACSL4O60488 711 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 ZNF217O75362 1048 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 IGLV3-25P01717 112 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 DPP6P42658 865 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 YWHAZP63104 245 aaKnown RBP10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 LSM11P83369 360 aaKnown RBP eCLIP10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 APBA1Q02410 837 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 MAP7D1Q3KQU3 841 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 FAM133BQ5BKY9 247 aaKnown RBP10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 CDKAL1Q5VV42 579 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 DMRTA1Q5VZB9 504 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 DPY19L2P1Q6NXN4 242 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 SLC36A4Q6YBV0 504 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 C12orf50Q8NA57 414 aaPredicted RBP10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 TMA16Q96EY4 203 aaKnown RBP10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 SLC39A13Q96H72 371 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 FCRL2Q96LA5 508 aaPredicted RBP10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 ACOX2Q99424 681 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 KRTAP3-3Q9BYR6 98 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 KRTAP3-2Q9BYR7 98 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 SAMSN1Q9NSI8 373 aaKnown RBP10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 ELOVL2Q9NXB9 296 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 NFE2L3Q9Y4A8 694 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 CEP83Q9Y592 693 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 STON1Q9Y6Q2 735 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 NYNRINQ9P2P1 1898 aaKnown RBP10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 FAM208BQ5VWN6 2430 aa10.82□□□□□ -0.68
PTCD2P1-201ENST00000554393 FASNP49327 2511 aaKnown RBP10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 FOXN3O00409 490 aaPredicted RBP10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 SLC30A4O14863 429 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 HSF2BPO75031 334 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 MBD3O95983 291 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 BCKDHBP21953 392 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 HLA-FP30511 346 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 HOXD12P35452 270 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 CLCN1P35523 988 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 KRT9P35527 623 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 WASP42768 502 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 CREB5Q02930 508 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 KCNMA1Q12791 1236 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 MTA1Q13330 715 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 STARD3Q14849 445 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 EFHC1Q5JVL4 640 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 PIK3R6Q5UE93 754 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 KLHDC7AQ5VTJ3 777 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 LPCAT2Q7L5N7 544 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 KIAA0907Q7Z7F0 614 aaPredicted RBP10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 METTL3Q86U44 580 aaKnown RBP10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 TAC4Q86UU9 113 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 ZDHHC17Q8IUH5 632 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 PGBD3Q8N328 593 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 WDTC1Q8N5D0 677 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 HJURPQ8NCD3 748 aaPredicted RBP10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 PPP1R13BQ96KQ4 1090 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 SLC2A13Q96QE2 648 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 CPXM1Q96SM3 734 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 NAA15Q9BXJ9 866 aaKnown RBP10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 PLCB1Q9NQ66 1216 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 ANO10Q9NW15 660 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 CACNA2D2Q9NY47 1150 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 CALCOCO1Q9P1Z2 691 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 AJAP1Q9UKB5 411 aaPredicted RBP10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 CLEC4EQ9ULY5 219 aa10.81□□□□□ -0.68
PTCD2P1-201ENST00000554393 NAALADL1Q9UQQ1 740 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms