RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 PSMC1P62191 440 aaKnown RBP17.74■□□□□ 0.43
NEK9-204ENST00000554258 KCNA1Q09470 495 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 ENPP2Q13822 863 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 ZSCAN23Q3MJ62 389 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 HECTD3Q5T447 861 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 STXBP4Q6ZWJ1 553 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 GUF1Q8N442 669 aaKnown RBP17.74■□□□□ 0.43
NEK9-204ENST00000554258 UCMAQ8WVF2 138 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 BHMTQ93088 406 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 SLC6A18Q96N87 628 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 DEPDC7Q96QD5 511 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 SYT15Q9BQS2 421 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 BTBD1Q9H0C5 482 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 LRRC4CQ9HCJ2 640 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 GDF3Q9NR23 364 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 GABRDO14764 452 aa17.73■□□□□ 0.43
NEK9-204ENST00000554258 PRPF6O94906 941 aaKnown RBP17.73■□□□□ 0.43
NEK9-204ENST00000554258 SFTPCP11686 197 aa17.73■□□□□ 0.43
NEK9-204ENST00000554258 POLR2BP30876 1174 aaKnown RBP17.73■□□□□ 0.43
NEK9-204ENST00000554258 MAPRE1Q15691 268 aaKnown RBP17.73■□□□□ 0.43
NEK9-204ENST00000554258 ARL13BQ3SXY8 428 aa17.73■□□□□ 0.43
NEK9-204ENST00000554258 PDZD8Q8NEN9 1154 aa17.73■□□□□ 0.43
NEK9-204ENST00000554258 LIN37Q96GY3 246 aaPredicted RBP17.73■□□□□ 0.43
NEK9-204ENST00000554258 ACCSQ96QU6 501 aa17.73■□□□□ 0.43
NEK9-204ENST00000554258 ORAI3Q9BRQ5 295 aa17.73■□□□□ 0.43
NEK9-204ENST00000554258 NACA2Q9H009 215 aa17.73■□□□□ 0.43
NEK9-204ENST00000554258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.73■□□□□ 0.43
NEK9-204ENST00000554258 AGAP1Q9UPQ3 857 aa17.73■□□□□ 0.43
NEK9-204ENST00000554258 SNX9Q9Y5X1 595 aa17.73■□□□□ 0.43
NEK9-204ENST00000554258 STYXL1Q9Y6J8 313 aa17.73■□□□□ 0.43
NEK9-204ENST00000554258 TULP1O00294 542 aaPredicted RBP17.72■□□□□ 0.43
NEK9-204ENST00000554258 LETM1O95202 739 aaPredicted RBP17.72■□□□□ 0.43
NEK9-204ENST00000554258 EPHX1P07099 455 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 FAM87AP0C7U9 286 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 ACO1P21399 889 aaKnown RBP17.72■□□□□ 0.43
NEK9-204ENST00000554258 PRKCHP24723 683 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 RBMS1P29558 406 aaKnown RBP17.72■□□□□ 0.43
NEK9-204ENST00000554258 BNIP3Q12983 259 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 SFMBT2Q5VUG0 894 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 FAM26EQ8N5C1 309 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 TOP6BLQ8N6T0 577 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 TMEM174Q8WUU8 243 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 EXTL1Q92935 676 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 C8orf48Q96LL4 319 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 CCSER2Q9H7U1 834 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 CRTAC1Q9NQ79 661 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 WDR70Q9NW82 654 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 PLK2Q9NYY3 685 aa17.72■□□□□ 0.43
NEK9-204ENST00000554258 PPP1R3GB7ZBB8 358 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 BIN1O00499 593 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 TGFB1I1O43294 461 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 CSO75390 466 aaKnown RBP17.71■□□□□ 0.43
NEK9-204ENST00000554258 KIF20AO95235 890 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 ITGB3P05106 788 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 YWHAQP27348 245 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 PRCPP42785 496 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 INHBCP55103 352 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 SNRPFP62306 86 aaKnown RBP17.71■□□□□ 0.43
NEK9-204ENST00000554258 ZNF234Q14588 700 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 KNOP1Q1ED39 458 aaKnown RBP17.71■□□□□ 0.43
NEK9-204ENST00000554258 SLC39A4Q6P5W5 647 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 HTR3DQ70Z44 454 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 OR2T3Q8NH03 318 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 FBXO32Q969P5 355 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 KCTD10Q9H3F6 313 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 AASDHPPTQ9NRN7 309 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 CDH9Q9ULB4 789 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 EXOC7Q9UPT5 735 aa17.71■□□□□ 0.43
NEK9-204ENST00000554258 KIF26BQ2KJY2 2108 aa17.71■□□□□ 0.42
NEK9-204ENST00000554258 ANKRD63C9JTQ0 380 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 WNT1P04628 370 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 CD44P16070 742 aaKnown RBP17.7■□□□□ 0.42
NEK9-204ENST00000554258 PPP1R2P41236 205 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 DAB2P98082 770 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 E2F5Q15329 346 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 GEN1Q17RS7 908 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 PROX2Q3B8N5 592 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 CDCP2Q5VXM1 449 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 ISM2Q6H9L7 571 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 SERPINA13PQ6UXR4 307 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 USP53Q70EK8 1073 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 SMYD4Q8IYR2 804 aaPredicted RBP17.7■□□□□ 0.42
NEK9-204ENST00000554258 MLKLQ8NB16 471 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 OVCA2Q8WZ82 227 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 CCNL2Q96S94 520 aaPredicted RBP17.7■□□□□ 0.42
NEK9-204ENST00000554258 SEMA3CQ99985 751 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 GDAP2Q9NXN4 497 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 CHORDC1Q9UHD1 332 aaPredicted RBP17.7■□□□□ 0.42
NEK9-204ENST00000554258 SLC27A6Q9Y2P4 619 aa17.7■□□□□ 0.42
NEK9-204ENST00000554258 A0A1W2PPC4 97 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 PPFIA2O75334 1257 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 ITGB2P05107 769 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 IGHV4-34P06331 123 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 LMO2P25791 158 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 SKOR1P84550 965 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 TFAMQ00059 246 aaKnown RBP17.69■□□□□ 0.42
NEK9-204ENST00000554258 SOWAHAQ2M3V2 549 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 ZCWPW2Q504Y3 356 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 C3orf38Q5JPI3 329 aa17.69■□□□□ 0.42
NEK9-204ENST00000554258 CT47A1Q5JQC4 288 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms