RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 WFDC5Q8TCV5 224 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 RHBDD1Q8TEB9 315 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 PRCCQ92733 491 aaPredicted RBP12.09□□□□□ -0.47
TUBB3-204ENST00000554116 ERCC4Q92889 916 aaPredicted RBP12.09□□□□□ -0.47
TUBB3-204ENST00000554116 TIGD1Q96MW7 591 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 GSDMAQ96QA5 445 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 ZNF510Q9Y2H8 683 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.09□□□□□ -0.47
TUBB3-204ENST00000554116 MYLKQ15746 1914 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 DOCK9Q9BZ29 2069 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 FAM149AA5PLN7 773 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 MAPK13O15264 365 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 GABBR2O75899 941 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 CLSTN1O94985 981 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 EPHX1P07099 455 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 PSMC2P35998 433 aaKnown RBP12.08□□□□□ -0.48
TUBB3-204ENST00000554116 PRCPP42785 496 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 VAMP7P51809 220 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 C19orf57Q0VDD7 668 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 EIF4HQ15056 248 aaKnown RBP12.08□□□□□ -0.48
TUBB3-204ENST00000554116 ZNF394Q53GI3 561 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 ZNF658Q5TYW1 1059 aaPredicted RBP12.08□□□□□ -0.48
TUBB3-204ENST00000554116 PM20D1Q6GTS8 502 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 ADIPOR2Q86V24 386 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 PIGZQ86VD9 579 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 FAM186BQ8IYM0 893 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 OR2T3Q8NH03 318 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 CYB5D2Q8WUJ1 264 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 SMARCE1Q969G3 411 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 MYO19Q96H55 970 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 LMLNQ96KR4 655 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 UBL7Q96S82 380 aaPredicted RBP12.08□□□□□ -0.48
TUBB3-204ENST00000554116 ARID3AQ99856 593 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 SLC2A11Q9BYW1 496 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 UBXN6Q9BZV1 441 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 DCLK3Q9C098 648 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 NIF3L1Q9GZT8 377 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 MTG2Q9H4K7 406 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 EBF2Q9HAK2 575 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 TM9SF3Q9HD45 589 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 MARCH2Q9P0N8 246 aa12.08□□□□□ -0.48
TUBB3-204ENST00000554116 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.08□□□□□ -0.48
TUBB3-204ENST00000554116 SLC12A8A0AV02 714 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 H0Y8X5 98 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 FLRT2O43155 660 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 SYNCRIPO60506 623 aaKnown RBP12.07□□□□□ -0.48
TUBB3-204ENST00000554116 TSPAN3O60637 253 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 GADD45BO75293 160 aaPredicted RBP12.07□□□□□ -0.48
TUBB3-204ENST00000554116 CER1O95813 267 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 IGHV4-34P06331 123 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 RALAP11233 206 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 KRT13P13646 458 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 CTSKP43235 329 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 RPS14P62263 151 aaKnown RBP12.07□□□□□ -0.48
TUBB3-204ENST00000554116 SMAD1Q15797 465 aaKnown RBP12.07□□□□□ -0.48
TUBB3-204ENST00000554116 SERPINA13PQ6UXR4 307 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 INTS8Q75QN2 995 aaKnown RBP12.07□□□□□ -0.48
TUBB3-204ENST00000554116 SCUBE3Q8IX30 993 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.07□□□□□ -0.48
TUBB3-204ENST00000554116 BOD1L1Q8NFC6 3051 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 SPATA20Q8TB22 786 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 TATDN2Q93075 761 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 BIRC7Q96CA5 298 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 CIPCQ9C0C6 399 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 PCED1AQ9H1Q7 454 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 OSGEPQ9NPF4 335 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 PRSS16Q9NQE7 514 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 STOML2Q9UJZ1 356 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 ANKRD6Q9Y2G4 727 aa12.07□□□□□ -0.48
TUBB3-204ENST00000554116 COL5A1P20908 1838 aaPredicted RBP12.07□□□□□ -0.48
TUBB3-204ENST00000554116 A0A087WV48 116 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 GOLGA8CPA6NN73 597 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 CETN3O15182 167 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 TIMM44O43615 452 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 AFF3P51826 1226 aaKnown RBP12.06□□□□□ -0.48
TUBB3-204ENST00000554116 CLDN6P56747 220 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 YWHAGP61981 247 aaKnown RBP eCLIP12.06□□□□□ -0.48
TUBB3-204ENST00000554116 SHBQ15464 509 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 EDRF1Q3B7T1 1238 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 ZCWPW2Q504Y3 356 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 COBLL1Q53SF7 1204 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 ARHGAP17Q68EM7 881 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 ISM2Q6H9L7 571 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 IL27RAQ6UWB1 636 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 FMNL3Q8IVF7 1028 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 ELOA2Q8IYF1 753 aaPredicted RBP12.06□□□□□ -0.48
TUBB3-204ENST00000554116 GALNT15Q8N3T1 639 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 DDI1Q8WTU0 396 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 UCMAQ8WVF2 138 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 MYEOVQ96EZ4 313 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 EEF2KMTQ96G04 330 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 HEXIM2Q96MH2 286 aaKnown RBP12.06□□□□□ -0.48
TUBB3-204ENST00000554116 CDC6Q99741 560 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 GTPBP4Q9BZE4 634 aaKnown RBP12.06□□□□□ -0.48
TUBB3-204ENST00000554116 ULBP1Q9BZM6 244 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 LHX5Q9H2C1 402 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 CISHQ9NSE2 258 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 SERGEFQ9UGK8 458 aa12.06□□□□□ -0.48
TUBB3-204ENST00000554116 PIEZO2Q9H5I5 2752 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms