RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 USP30Q70CQ3 517 aa10.07□□□□□ -0.8
CHD8-205ENST00000553651 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.07□□□□□ -0.8
CHD8-205ENST00000553651 C12orf29Q8N999 325 aa10.07□□□□□ -0.8
CHD8-205ENST00000553651 RASSF8Q8NHQ8 419 aa10.07□□□□□ -0.8
CHD8-205ENST00000553651 HPS3Q969F9 1004 aa10.07□□□□□ -0.8
CHD8-205ENST00000553651 SYAP1Q96A49 352 aaPredicted RBP10.07□□□□□ -0.8
CHD8-205ENST00000553651 RSPH9Q9H1X1 276 aaPredicted RBP10.07□□□□□ -0.8
CHD8-205ENST00000553651 PABPC3Q9H361 631 aaKnown RBP10.07□□□□□ -0.8
CHD8-205ENST00000553651 MTG2Q9H4K7 406 aa10.07□□□□□ -0.8
CHD8-205ENST00000553651 ERVMER34-1Q9H9K5 563 aa10.07□□□□□ -0.8
CHD8-205ENST00000553651 KIAA1586Q9HCI6 787 aa10.07□□□□□ -0.8
CHD8-205ENST00000553651 GDF3Q9NR23 364 aa10.07□□□□□ -0.8
CHD8-205ENST00000553651 FAM49BQ9NUQ9 324 aa10.07□□□□□ -0.8
CHD8-205ENST00000553651 PCDHA5Q9Y5H7 936 aa10.07□□□□□ -0.8
CHD8-205ENST00000553651 USP3Q9Y6I4 520 aa10.07□□□□□ -0.8
CHD8-205ENST00000553651 A0A087X0B3 334 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 K7ENP7 123 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 TRIM38O00635 465 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 VNN1O95497 513 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 DNTTP04053 509 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 HMBSP08397 361 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 IDEP14735 1019 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 ERVPABLB-1P60509 514 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 TTC31Q49AM3 519 aaPredicted RBP10.06□□□□□ -0.8
CHD8-205ENST00000553651 FNDC3BQ53EP0 1204 aaKnown RBP10.06□□□□□ -0.8
CHD8-205ENST00000553651 BROXQ5VW32 411 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 KIAA1614Q5VZ46 1190 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 ZNF776Q68DI1 518 aaPredicted RBP10.06□□□□□ -0.8
CHD8-205ENST00000553651 INO80CQ6PI98 192 aaPredicted RBP10.06□□□□□ -0.8
CHD8-205ENST00000553651 SCARA5Q6ZMJ2 495 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 SV2BQ7L1I2 683 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 EPM2AIP1Q7L775 607 aaPredicted RBP10.06□□□□□ -0.8
CHD8-205ENST00000553651 CCDC186Q7Z3E2 898 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 DENND1CQ8IV53 801 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 EXD3Q8N9H8 876 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 RDH13Q8NBN7 331 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 WFDC5Q8TCV5 224 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 KCNE4Q8WWG9 221 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 CCDC127Q96BQ5 260 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 ARID3AQ99856 593 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.06□□□□□ -0.8
CHD8-205ENST00000553651 DPH1Q9BZG8 443 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 TRIM4Q9C037 500 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 DCLK3Q9C098 648 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 PNPLA8Q9NP80 782 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 AGPAT3Q9NRZ7 376 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 PANK4Q9NVE7 773 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 CLIC5Q9NZA1 410 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 NAGPAQ9UK23 515 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 KIF3AQ9Y496 699 aa10.06□□□□□ -0.8
CHD8-205ENST00000553651 DOCK9Q9BZ29 2069 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 FAM47DPA6NHR8 397 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 TLR4O00206 839 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 KLK10O43240 276 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 SIGLEC6O43699 453 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 LZTS3O60299 673 aaPredicted RBP10.05□□□□□ -0.8
CHD8-205ENST00000553651 BMP15O95972 392 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 FAM200BP0CF97 657 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 ADORA2BP29275 332 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 LSSP48449 732 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 ARRB1P49407 418 aaPredicted RBP10.05□□□□□ -0.8
CHD8-205ENST00000553651 CASP4P49662 377 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 CCR5P51681 352 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 NDST1P52848 882 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 GABREP78334 506 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 COG7P83436 770 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 EHHADHQ08426 723 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 TRPC3Q13507 836 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 IGF2-ASQ6U949 168 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 CHST9Q7L1S5 443 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 SLC25A45Q8N413 288 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 OR2T34Q8NGX1 318 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 WFIKKN2Q8TEU8 576 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 DDI1Q8WTU0 396 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 GOLGA1Q92805 767 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 JAKMIP2Q96AA8 810 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 VCPIP1Q96JH7 1222 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 LMLNQ96KR4 655 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 TWNKQ96RR1 684 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 NEUROG2Q9H2A3 272 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 AASDHPPTQ9NRN7 309 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 ABCB8Q9NUT2 735 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 FBXL12Q9NXK8 326 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 RASAL2Q9UJF2 1139 aa10.05□□□□□ -0.8
CHD8-205ENST00000553651 FBXO2Q9UK22 296 aaPredicted RBP10.05□□□□□ -0.8
CHD8-205ENST00000553651 TEP1Q99973 2627 aaKnown RBP10.05□□□□□ -0.8
CHD8-205ENST00000553651 UTP20O75691 2785 aaKnown RBP10.05□□□□□ -0.8
CHD8-205ENST00000553651 LY6G6EA0A0G2JKS1 128 aa10.04□□□□□ -0.8
CHD8-205ENST00000553651 LATO43561 262 aa10.04□□□□□ -0.8
CHD8-205ENST00000553651 OPA1O60313 960 aa10.04□□□□□ -0.8
CHD8-205ENST00000553651 C4BPAP04003 597 aaKnown RBP10.04□□□□□ -0.8
CHD8-205ENST00000553651 CYBBP04839 570 aa10.04□□□□□ -0.8
CHD8-205ENST00000553651 DLDP09622 509 aaKnown RBP10.04□□□□□ -0.8
CHD8-205ENST00000553651 GIMD1P0DJR0 217 aa10.04□□□□□ -0.8
CHD8-205ENST00000553651 PABPC1P11940 636 aaKnown RBP10.04□□□□□ -0.8
CHD8-205ENST00000553651 PSEN1P49768 467 aa10.04□□□□□ -0.8
CHD8-205ENST00000553651 SGSHP51688 502 aa10.04□□□□□ -0.8
CHD8-205ENST00000553651 CLDN10P78369 228 aa10.04□□□□□ -0.8
CHD8-205ENST00000553651 E2F1Q01094 437 aa10.04□□□□□ -0.8
CHD8-205ENST00000553651 EFEMP1Q12805 493 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms