RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 TAOK3Q9H2K8 898 aa5.6□□□□□ -1.51
SCFD1-209ENST00000553280 ZNF703Q9H7S9 590 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-209ENST00000553280 IL21RQ9HBE5 538 aa5.6□□□□□ -1.51
SCFD1-209ENST00000553280 KLC4Q9NSK0 619 aa5.6□□□□□ -1.51
SCFD1-209ENST00000553280 TBCCD1Q9NVR7 557 aa5.6□□□□□ -1.51
SCFD1-209ENST00000553280 POLG2Q9UHN1 485 aa5.6□□□□□ -1.51
SCFD1-209ENST00000553280 CNOT7Q9UIV1 285 aaKnown RBP5.6□□□□□ -1.51
SCFD1-209ENST00000553280 CNPY2Q9Y2B0 182 aa5.6□□□□□ -1.51
SCFD1-209ENST00000553280 ANP32CO43423 234 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 TMPRSS11DO60235 418 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 C1SP09871 688 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 ACP5P13686 325 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 ZNF37AP17032 561 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-209ENST00000553280 NR4A1P22736 598 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 GRK5P34947 590 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 PCP4P48539 62 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 CLCN2P51788 898 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 RCAN1P53805 252 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 RNASELQ05823 741 aaKnown RBP5.59□□□□□ -1.51
SCFD1-209ENST00000553280 DEUP1Q05D60 604 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 THOC5Q13769 683 aaKnown RBP5.59□□□□□ -1.51
SCFD1-209ENST00000553280 CYP1B1Q16678 543 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 TSTQ16762 297 aaKnown RBP5.59□□□□□ -1.51
SCFD1-209ENST00000553280 PRICKLE4Q2TBC4 344 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 MIIPQ5JXC2 388 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 SYNE3Q6ZMZ3 975 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 CHD1LQ86WJ1 897 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 ZNF276Q8N554 614 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 PNPLA1Q8N8W4 532 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 TOR1AIP2Q8NFQ8 470 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 IL17DQ8TAD2 202 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 GLMPQ8WWB7 406 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 XAGE5Q8WWM1 108 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 ARRDC3Q96B67 414 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 TRMT61AQ96FX7 289 aaKnown RBP5.59□□□□□ -1.51
SCFD1-209ENST00000553280 PRR11Q96HE9 360 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-209ENST00000553280 PLEKHG4BQ96PX9 1271 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 PRR25Q96S07 402 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 PHF7Q9BWX1 381 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-209ENST00000553280 EHD3Q9NZN3 535 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 MGAT4CQ9UBM8 478 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 DKK3Q9UBP4 350 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 ASAP1Q9ULH1 1129 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 GDAQ9Y2T3 454 aa5.59□□□□□ -1.51
SCFD1-209ENST00000553280 CYP3A7-CYP3A51PA0A087WV96 503 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 WDR27A2RRH5 827 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 PI4KAP2A4QPH2 592 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 PEX12O00623 359 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 FIBPO43427 364 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 CA12O43570 354 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 DHX16O60231 1041 aaKnown RBP5.58□□□□□ -1.52
SCFD1-209ENST00000553280 TULP3O75386 442 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 CHMP24386 653 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 CYP3A7P24462 503 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 IGHMBP2P38935 993 aaKnown RBP5.58□□□□□ -1.52
SCFD1-209ENST00000553280 CCR9P51686 369 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 SUMO2P61956 95 aaKnown RBP5.58□□□□□ -1.52
SCFD1-209ENST00000553280 RPP30P78346 268 aaKnown RBP5.58□□□□□ -1.52
SCFD1-209ENST00000553280 GUCY1B3Q02153 619 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 BMPR2Q13873 1038 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 PTPRRQ15256 657 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 NFIL3Q16649 462 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 LSM12Q3MHD2 195 aaKnown RBP5.58□□□□□ -1.52
SCFD1-209ENST00000553280 PTCHD4Q6ZW05 846 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 H1FNTQ75WM6 255 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-209ENST00000553280 SIRT6Q8N6T7 355 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 OR52L2PQ8NGH6 319 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 ZCCHC10Q8TBK6 192 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 MASTLQ96GX5 879 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 RSRC1Q96IZ7 334 aaKnown RBP5.58□□□□□ -1.52
SCFD1-209ENST00000553280 PCED1AQ9H1Q7 454 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 STN1Q9H668 368 aaKnown RBP5.58□□□□□ -1.52
SCFD1-209ENST00000553280 SAP30LQ9HAJ7 183 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 PARPBPQ9NWS1 579 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 CEP72Q9P209 647 aa5.58□□□□□ -1.52
SCFD1-209ENST00000553280 FSD2A1L4K1 749 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 UNC119BA6NIH7 251 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 VWC2LB2RUY7 222 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 YY2O15391 372 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 TJP3O95049 919 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 NXPH3O95157 252 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 F9P00740 461 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 DLDP09622 509 aaKnown RBP5.57□□□□□ -1.52
SCFD1-209ENST00000553280 TMIGD3P0DMS9 266 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-209ENST00000553280 PEPDP12955 493 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 PAFAH1B1P43034 410 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 POLD2P49005 469 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 PDE1AP54750 535 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 IRX6P78412 446 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-209ENST00000553280 SLC25A3Q00325 362 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 E2F1Q01094 437 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 TP53BP2Q13625 1128 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 ERV3-1Q14264 604 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 SEC23BQ15437 767 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 WDR93Q6P2C0 686 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 MTHFD1LQ6UB35 978 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 DPY19L3Q6ZPD9 716 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 TMTC3Q6ZXV5 915 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 PARS2Q7L3T8 475 aaKnown RBP5.57□□□□□ -1.52
SCFD1-209ENST00000553280 ARHGEF19Q8IW93 802 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms