RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 CD70P32970 193 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 ACSL1P33121 698 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 RDXP35241 583 aaKnown RBP11.95□□□□□ -0.5
NEK3-204ENST00000552973 LRRC63Q05C16 580 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 PTPRNQ16849 979 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 MBLAC2Q68D91 279 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 NAXDQ8IW45 347 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 WFDC5Q8TCV5 224 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 SETD7Q8WTS6 366 aaKnown RBP11.95□□□□□ -0.5
NEK3-204ENST00000552973 ZCCHC14Q8WYQ9 949 aaKnown RBP11.95□□□□□ -0.5
NEK3-204ENST00000552973 LHX5Q9H2C1 402 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 TMEM245Q9H330 911 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 C6orf106Q9H6K1 298 aaPredicted RBP11.95□□□□□ -0.5
NEK3-204ENST00000552973 GAREM1Q9H706 876 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 METTL14Q9HCE5 456 aaKnown RBP11.95□□□□□ -0.5
NEK3-204ENST00000552973 STOML2Q9UJZ1 356 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 MAN1B1Q9UKM7 699 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 KIAA1257Q9ULG3 409 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 MSRB2Q9Y3D2 182 aa11.95□□□□□ -0.5
NEK3-204ENST00000552973 ZFHX4Q86UP3 3567 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 A0A1B0GVT2 93 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 SRRM3A6NNA2 597 aaPredicted RBP11.94□□□□□ -0.5
NEK3-204ENST00000552973 KCNK3O14649 394 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 PSMA7O14818 248 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 PAEPP09466 180 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 CSNK1EP49674 416 aaKnown RBP11.94□□□□□ -0.5
NEK3-204ENST00000552973 TBX4P57082 545 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 BNC1Q01954 994 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 SLC14A1Q13336 389 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 CAMK2GQ13555 558 aaPredicted RBP11.94□□□□□ -0.5
NEK3-204ENST00000552973 E2F5Q15329 346 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 CNGA2Q16280 664 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 HLA-BQ31612 363 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 PIK3R6Q5UE93 754 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 ARHGEF19Q8IW93 802 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 AHI1Q8N157 1196 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 SPATA20Q8TB22 786 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 WFIKKN2Q8TEU8 576 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 MYEOVQ96EZ4 313 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 DHTKD1Q96HY7 919 aaPredicted RBP11.94□□□□□ -0.5
NEK3-204ENST00000552973 PRSS16Q9NQE7 514 aa11.94□□□□□ -0.5
NEK3-204ENST00000552973 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.94□□□□□ -0.5
NEK3-204ENST00000552973 MYO18AQ92614 2054 aaKnown RBP11.93□□□□□ -0.5
NEK3-204ENST00000552973 H0Y626 953 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 BIN1O00499 593 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 ACSL4O60488 711 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 FSBPO95073 299 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 TRIM16O95361 564 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 LATS1O95835 1130 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 IGLV3-19P01714 112 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 LTFP02788 710 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 FTH1P19P0C7X4 201 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 POLR2EP19388 210 aaKnown RBP11.93□□□□□ -0.5
NEK3-204ENST00000552973 SLC11A2P49281 568 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 STX17P56962 302 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 RPS14P62263 151 aaKnown RBP11.93□□□□□ -0.5
NEK3-204ENST00000552973 STIM1Q13586 685 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 HNRNPDQ14103 355 aaKnown RBP11.93□□□□□ -0.5
NEK3-204ENST00000552973 ZNF423Q2M1K9 1284 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 FAM133BQ5BKY9 247 aaKnown RBP11.93□□□□□ -0.5
NEK3-204ENST00000552973 NADSYN1Q6IA69 706 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 MSANTD2Q6P1R3 559 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 LAYNQ6UX15 382 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 RAB44Q7Z6P3 723 aaPredicted RBP11.93□□□□□ -0.5
NEK3-204ENST00000552973 KIAA0907Q7Z7F0 614 aaPredicted RBP11.93□□□□□ -0.5
NEK3-204ENST00000552973 MFN1Q8IWA4 741 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 UNC45BQ8IWX7 931 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 SCUBE3Q8IX30 993 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 CARNMT1Q8N4J0 409 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.93□□□□□ -0.5
NEK3-204ENST00000552973 LMO3Q8TAP4 145 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 ADAM32Q8TC27 787 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 NELFBQ8WX92 580 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 IRGQQ8WZA9 623 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 GOLGA1Q92805 767 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 CEP63Q96MT8 703 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 ZDHHC5Q9C0B5 715 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 ST7Q9NRC1 585 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 TM7SF3Q9NS93 570 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 NAALADL1Q9UQQ1 740 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 FNDC3AQ9Y2H6 1198 aaKnown RBP11.93□□□□□ -0.5
NEK3-204ENST00000552973 EPG5Q9HCE0 2579 aa11.93□□□□□ -0.5
NEK3-204ENST00000552973 TNRC6BQ9UPQ9 1833 aaKnown RBP11.93□□□□□ -0.5
NEK3-204ENST00000552973 MAP1BP46821 2468 aaKnown RBP11.92□□□□□ -0.5
NEK3-204ENST00000552973 TMEM8BA6NDV4 472 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 FAM47DPA6NHR8 397 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 GOLGA8CPA6NN73 597 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 PPP1R3GB7ZBB8 358 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 MOCS2O96007 188 aaPredicted RBP11.92□□□□□ -0.5
NEK3-204ENST00000552973 IGLV3-27P01718 113 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 DNTTP04053 509 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 FYNP06241 537 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 ATP5BP06576 529 aaKnown RBP11.92□□□□□ -0.5
NEK3-204ENST00000552973 DLDP09622 509 aaKnown RBP11.92□□□□□ -0.5
NEK3-204ENST00000552973 MATKP42679 507 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 NUMBP49757 651 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 ZNF445P59923 1031 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 RPS24P62847 133 aaKnown RBP11.92□□□□□ -0.5
NEK3-204ENST00000552973 CETN1Q12798 172 aa11.92□□□□□ -0.5
NEK3-204ENST00000552973 KIF19Q2TAC6 998 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms