RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 CASQ1P31415 396 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 RDXP35241 583 aaKnown RBP12.57□□□□□ -0.4
ERBB3-216ENST00000550869 CXCR3P49682 368 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 ATP11AP98196 1134 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 PPP2R5DQ14738 602 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 RPS6KA1Q15418 735 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 DAB2IPQ5VWQ8 1189 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 TXNRD3NBQ6F5E7 133 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 MAMSTRQ6ZN01 415 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 PDZD4Q76G19 769 aaPredicted RBP12.57□□□□□ -0.4
ERBB3-216ENST00000550869 TAC4Q86UU9 113 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 RHOT1Q8IXI2 618 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 HS6ST3Q8IZP7 471 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 GPR161Q8N6U8 529 aaKnown RBP12.57□□□□□ -0.4
ERBB3-216ENST00000550869 SUMF1Q8NBK3 374 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 ZBTB44Q8NCP5 570 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 FAM71BQ8TC56 605 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 ALG3Q92685 438 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 KRT35Q92764 455 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 NELL1Q92832 810 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 IRF7Q92985 503 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 SLC39A13Q96H72 371 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 ASB16Q96NS5 453 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 PEBP4Q96S96 227 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 CDK5RAP1Q96SZ6 601 aaKnown RBP12.57□□□□□ -0.4
ERBB3-216ENST00000550869 CORO1BQ9BR76 489 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 ZFP14Q9HCL3 533 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 ZSCAN32Q9NX65 697 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 TRPM5Q9NZQ8 1165 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 USP18Q9UMW8 372 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 SNX12Q9UMY4 172 aa12.57□□□□□ -0.4
ERBB3-216ENST00000550869 PACSIN2Q9UNF0 486 aaPredicted RBP12.57□□□□□ -0.4
ERBB3-216ENST00000550869 CES2O00748 559 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 NRG2O14511 850 aaPredicted RBP12.56□□□□□ -0.4
ERBB3-216ENST00000550869 SPOPO43791 374 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 TLR5O60602 858 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 FGF19O95750 216 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 IGLV3-27P01718 113 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 SDHBP21912 280 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 FCARP24071 287 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 SULT1E1P49888 294 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 ARSEP51690 589 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 ATXN1P54253 815 aaKnown RBP12.56□□□□□ -0.4
ERBB3-216ENST00000550869 MLLT6P55198 1093 aaPredicted RBP12.56□□□□□ -0.4
ERBB3-216ENST00000550869 SCAPQ12770 1279 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 PUM1Q14671 1186 aaKnown RBP eCLIP12.56□□□□□ -0.4
ERBB3-216ENST00000550869 TAF12Q16514 161 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 BOLA3Q53S33 107 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 HECTD3Q5T447 861 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 DCAF12L1Q5VU92 463 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 TANGO2Q6ICL3 276 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 C1orf228Q6PIY5 440 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 PSTKQ8IV42 348 aaKnown RBP12.56□□□□□ -0.4
ERBB3-216ENST00000550869 KIAA2013Q8IYS2 634 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 KIF18AQ8NI77 898 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 DEPDC1BQ8WUY9 529 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 TEKT4Q8WW24 435 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 SMARCD2Q92925 531 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 NTAN1Q96AB6 310 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 E2F7Q96AV8 911 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 TRMT61BQ9BVS5 477 aaKnown RBP12.56□□□□□ -0.4
ERBB3-216ENST00000550869 BRD9Q9H8M2 597 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 TRPV4Q9HBA0 871 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 RRAGDQ9NQL2 400 aaPredicted RBP12.56□□□□□ -0.4
ERBB3-216ENST00000550869 PRMT8Q9NR22 394 aaPredicted RBP12.56□□□□□ -0.4
ERBB3-216ENST00000550869 HEBP1Q9NRV9 189 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 PIGVQ9NUD9 493 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 MTF2Q9Y483 593 aaPredicted RBP12.56□□□□□ -0.4
ERBB3-216ENST00000550869 COL4A3Q01955 1670 aa12.56□□□□□ -0.4
ERBB3-216ENST00000550869 TICRRQ7Z2Z1 1910 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 KCNU1A8MYU2 1149 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 I6L893 689 aaPredicted RBP12.55□□□□□ -0.4
ERBB3-216ENST00000550869 MDM4O15151 490 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 COCHO43405 550 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 TBX18O95935 607 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 KRT7P08729 469 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 DESP17661 470 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 PSMC3P17980 439 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 TCP1P17987 556 aaKnown RBP12.55□□□□□ -0.4
ERBB3-216ENST00000550869 TARSP26639 723 aaKnown RBP12.55□□□□□ -0.4
ERBB3-216ENST00000550869 GABRR2P28476 465 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 CDC25CP30307 473 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 GBP1P32455 592 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 CCR2P41597 374 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 MARCKSL1P49006 195 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 NRLP54845 237 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 AIF1P55008 147 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 CSTF1Q05048 431 aaKnown RBP12.55□□□□□ -0.4
ERBB3-216ENST00000550869 DEUP1Q05D60 604 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 TAZQ16635 292 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 HADHQ16836 314 aaKnown RBP12.55□□□□□ -0.4
ERBB3-216ENST00000550869 CDO1Q16878 200 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 FAM78AQ5JUQ0 283 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 TADA2BQ86TJ2 420 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 VSIG1Q86XK7 387 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 KATNAL2Q8IYT4 538 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 RNF139Q8WU17 664 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 RMDN1Q96DB5 314 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 MSANTD3Q96H12 275 aa12.55□□□□□ -0.4
ERBB3-216ENST00000550869 SERPINB11Q96P15 392 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms