RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 EIF4E1BA6NMX2 242 aaKnown RBP8□□□□□ -1.13
NEK3-201ENST00000550331 PRRT4C9JH25 899 aa8□□□□□ -1.13
NEK3-201ENST00000550331 H0Y626 953 aa8□□□□□ -1.13
NEK3-201ENST00000550331 MDM4O15151 490 aa8□□□□□ -1.13
NEK3-201ENST00000550331 STC2O76061 302 aa8□□□□□ -1.13
NEK3-201ENST00000550331 TRIM16O95361 564 aa8□□□□□ -1.13
NEK3-201ENST00000550331 PENKP01210 267 aaPredicted RBP8□□□□□ -1.13
NEK3-201ENST00000550331 CISD3P0C7P0 127 aa8□□□□□ -1.13
NEK3-201ENST00000550331 CD58P19256 250 aa8□□□□□ -1.13
NEK3-201ENST00000550331 RDXP35241 583 aaKnown RBP8□□□□□ -1.13
NEK3-201ENST00000550331 CHKAP35790 457 aa8□□□□□ -1.13
NEK3-201ENST00000550331 PSMC2P35998 433 aaKnown RBP8□□□□□ -1.13
NEK3-201ENST00000550331 WASP42768 502 aa8□□□□□ -1.13
NEK3-201ENST00000550331 KRT85P78386 507 aa8□□□□□ -1.13
NEK3-201ENST00000550331 COG7P83436 770 aa8□□□□□ -1.13
NEK3-201ENST00000550331 DPYDQ12882 1025 aa8□□□□□ -1.13
NEK3-201ENST00000550331 STARD3Q14849 445 aa8□□□□□ -1.13
NEK3-201ENST00000550331 E2F5Q15329 346 aa8□□□□□ -1.13
NEK3-201ENST00000550331 EDRF1Q3B7T1 1238 aa8□□□□□ -1.13
NEK3-201ENST00000550331 ZCWPW2Q504Y3 356 aa8□□□□□ -1.13
NEK3-201ENST00000550331 FYB2Q5VWT5 728 aa8□□□□□ -1.13
NEK3-201ENST00000550331 KRT39Q6A163 491 aa8□□□□□ -1.13
NEK3-201ENST00000550331 SCD5Q86SK9 330 aa8□□□□□ -1.13
NEK3-201ENST00000550331 PIP4P1Q86T03 277 aa8□□□□□ -1.13
NEK3-201ENST00000550331 ARHGAP18Q8N392 663 aa8□□□□□ -1.13
NEK3-201ENST00000550331 HDDC3Q8N4P3 179 aa8□□□□□ -1.13
NEK3-201ENST00000550331 CHCHD4Q8N4Q1 142 aa8□□□□□ -1.13
NEK3-201ENST00000550331 SPRYD3Q8NCJ5 442 aa8□□□□□ -1.13
NEK3-201ENST00000550331 JAKMIP2Q96AA8 810 aa8□□□□□ -1.13
NEK3-201ENST00000550331 ZNF419Q96HQ0 510 aaPredicted RBP8□□□□□ -1.13
NEK3-201ENST00000550331 MRGPRX1Q96LB2 322 aa8□□□□□ -1.13
NEK3-201ENST00000550331 SPATA32Q96LK8 384 aa8□□□□□ -1.13
NEK3-201ENST00000550331 HSPA12BQ96MM6 686 aa8□□□□□ -1.13
NEK3-201ENST00000550331 UBXN6Q9BZV1 441 aa8□□□□□ -1.13
NEK3-201ENST00000550331 SUSD2Q9UGT4 822 aa8□□□□□ -1.13
NEK3-201ENST00000550331 FBXO10Q9UK96 956 aa8□□□□□ -1.13
NEK3-201ENST00000550331 CYP8B1Q9UNU6 501 aa8□□□□□ -1.13
NEK3-201ENST00000550331 SLC27A6Q9Y2P4 619 aa8□□□□□ -1.13
NEK3-201ENST00000550331 CELSR3Q9NYQ7 3312 aa8□□□□□ -1.13
NEK3-201ENST00000550331 PLXNB3Q9ULL4 1909 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 SHROOM3Q8TF72 1996 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 A0A1W2PQ27 194 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 A0A1W2PQ64 194 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 STX10O60499 249 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 OPHN1O60890 802 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 KLKB1P03952 638 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 SYPP08247 313 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 MXI1P50539 228 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 NDUFA8P51970 172 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 MFAP3P55082 362 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 SLC8A3P57103 927 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 ADAM9Q13443 819 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 ENPP2Q13822 863 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 HNRNPDQ14103 355 aaKnown RBP7.99□□□□□ -1.13
NEK3-201ENST00000550331 EIF4HQ15056 248 aaKnown RBP7.99□□□□□ -1.13
NEK3-201ENST00000550331 RAB41Q5JT25 222 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 SYCP2LQ5T4T6 812 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 PPP1R26Q5T8A7 1209 aaPredicted RBP7.99□□□□□ -1.13
NEK3-201ENST00000550331 ARHGAP17Q68EM7 881 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 SLC41A1Q8IVJ1 513 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 CPXM2Q8N436 756 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 MINDY1Q8N5J2 469 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 DEFB119Q8N690 84 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 TRIML1Q8N9V2 468 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 FBXL13Q8NEE6 735 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 FOXJ1Q92949 421 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 TMEM176AQ96HP8 235 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 HEXIM2Q96MH2 286 aaKnown RBP7.99□□□□□ -1.13
NEK3-201ENST00000550331 GTPBP2Q9BX10 602 aaKnown RBP7.99□□□□□ -1.13
NEK3-201ENST00000550331 DCLK3Q9C098 648 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 SCAND2PQ9GZW5 306 aaPredicted RBP7.99□□□□□ -1.13
NEK3-201ENST00000550331 MMRN2Q9H8L6 949 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 DNAAF2Q9NVR5 837 aaKnown RBP7.99□□□□□ -1.13
NEK3-201ENST00000550331 CACNA2D2Q9NY47 1150 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 RASAL2Q9UJF2 1139 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 NUDT5Q9UKK9 219 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 STRIP2Q9ULQ0 834 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 MAPK8IP1Q9UQF2 711 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 NFE2L3Q9Y4A8 694 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 RAD54BQ9Y620 910 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 STON1Q9Y6Q2 735 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 ASXL3Q9C0F0 2248 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 MYO18AQ92614 2054 aaKnown RBP7.99□□□□□ -1.13
NEK3-201ENST00000550331 PTPRBP23467 1997 aa7.99□□□□□ -1.13
NEK3-201ENST00000550331 FAM221BA6H8Z2 402 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 NDUFS2O75306 463 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 IGLV3-19P01714 112 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 CAPNS1P04632 268 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 CYBBP04839 570 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 GNSP15586 552 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 CD6P30203 668 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 CORO1AP31146 461 aaKnown RBP7.98□□□□□ -1.13
NEK3-201ENST00000550331 RAD23BP54727 409 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 ZNF445P59923 1031 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 YWHAGP61981 247 aaKnown RBP eCLIP7.98□□□□□ -1.13
NEK3-201ENST00000550331 SCAPQ12770 1279 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 EFEMP1Q12805 493 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 SLC14A1Q13336 389 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 PTPRNQ16849 979 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 GEN1Q17RS7 908 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms