RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 RFC1P35251 1148 aaPredicted RBP12.35□□□□□ -0.43
PFDN5-208ENST00000549995 ZNF143P52747 638 aaPredicted RBP12.35□□□□□ -0.43
PFDN5-208ENST00000549995 MESP2Q0VG99 397 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 GRSF1Q12849 480 aaKnown RBP eCLIP12.35□□□□□ -0.43
PFDN5-208ENST00000549995 GAS6Q14393 721 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 MS4A13Q5J8X5 152 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 ZNF683Q8IZ20 524 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 EMC1Q8N766 993 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 ATP6V0D2Q8N8Y2 350 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 ZNF557Q8N988 423 aaPredicted RBP12.35□□□□□ -0.43
PFDN5-208ENST00000549995 DTWD2Q8NBA8 298 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 CCDC26Q8TAB7 109 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 KCNV2Q8TDN2 545 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 RXFP2Q8WXD0 754 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 NTAN1Q96AB6 310 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 LMLNQ96KR4 655 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 C1orf74Q96LT6 269 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 CFAP57Q96MR6 1250 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 XPO6Q96QU8 1125 aaKnown RBP12.35□□□□□ -0.43
PFDN5-208ENST00000549995 PNKPQ96T60 521 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 DDX50Q9BQ39 737 aaKnown RBP12.35□□□□□ -0.43
PFDN5-208ENST00000549995 SELENOOQ9BVL4 669 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 BBS2Q9BXC9 721 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 PRMT8Q9NR22 394 aaPredicted RBP12.35□□□□□ -0.43
PFDN5-208ENST00000549995 PARVAQ9NVD7 372 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 SCINQ9Y6U3 715 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 PLXND1Q9Y4D7 1925 aa12.35□□□□□ -0.43
PFDN5-208ENST00000549995 IGLV3-10A0A075B6K4 115 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 ANKRD62A6NC57 917 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 TMEM191CA6NGB0 347 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 NEDD8-MDP1E9PL57 170 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 K7EQS6 105 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 GALR2O43603 387 aaPredicted RBP12.34□□□□□ -0.43
PFDN5-208ENST00000549995 KAT7O95251 611 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 LCA5LO95447 670 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 ADCY5O95622 1261 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 EGFP01133 1207 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 CYBBP04839 570 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 CYP1A2P05177 515 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 TDGF1P13385 188 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 PDGFRAP16234 1089 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 ABCB4P21439 1286 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 EIF4A3P38919 411 aaKnown RBP12.34□□□□□ -0.43
PFDN5-208ENST00000549995 GRIA2P42262 883 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 TNFRSF4P43489 277 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 SLC6A11P48066 632 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 SGSHP51688 502 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 AIF1P55008 147 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 ADKP55263 362 aaKnown RBP12.34□□□□□ -0.43
PFDN5-208ENST00000549995 HDAC4P56524 1084 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 RPL7AP62424 266 aaKnown RBP12.34□□□□□ -0.43
PFDN5-208ENST00000549995 DEUP1Q05D60 604 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 ZNF252P-AS1Q0IIN9 211 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 SCAPQ12770 1279 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 HSF5Q4G112 596 aaPredicted RBP12.34□□□□□ -0.43
PFDN5-208ENST00000549995 TTC39BQ5VTQ0 682 aaPredicted RBP12.34□□□□□ -0.43
PFDN5-208ENST00000549995 ALKBH5Q6P6C2 394 aaKnown RBP12.34□□□□□ -0.43
PFDN5-208ENST00000549995 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.34□□□□□ -0.43
PFDN5-208ENST00000549995 HJURPQ8NCD3 748 aaPredicted RBP12.34□□□□□ -0.43
PFDN5-208ENST00000549995 TTC16Q8NEE8 873 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 NELL1Q92832 810 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 PANX2Q96RD6 677 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 HAPLN3Q96S86 360 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 CNPY3Q9BT09 278 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 LMAN1LQ9HAT1 526 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 ANLNQ9NQW6 1124 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 DEC1Q9P2X7 70 aa12.34□□□□□ -0.43
PFDN5-208ENST00000549995 XPO7Q9UIA9 1087 aaKnown RBP12.34□□□□□ -0.43
PFDN5-208ENST00000549995 NDRG2Q9UN36 371 aaKnown RBP12.34□□□□□ -0.43
PFDN5-208ENST00000549995 CACNA1IQ9P0X4 2223 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 CACNA1HO95180 2353 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 EML5Q05BV3 1969 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 CCP110O43303 1012 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 PAGE1O75459 146 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 GJB6O95452 261 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 APODP05090 189 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 DCNP07585 359 aaKnown RBP12.33□□□□□ -0.44
PFDN5-208ENST00000549995 C7P10643 843 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 TACR2P21452 398 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 KIR2DL1P43626 348 aaPredicted RBP12.33□□□□□ -0.44
PFDN5-208ENST00000549995 RNASE9P60153 205 aaKnown RBP12.33□□□□□ -0.44
PFDN5-208ENST00000549995 OGDHQ02218 1023 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 TCEAL1Q15170 157 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 ANO4Q32M45 955 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 MANEALQ5VSG8 457 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 GRAMD4Q6IC98 578 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 TPGS1Q6ZTW0 290 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 MAML2Q8IZL2 1156 aaPredicted RBP12.33□□□□□ -0.44
PFDN5-208ENST00000549995 SPEM1Q8N4L4 309 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 ZNF653Q96CK0 615 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 MYEOVQ96EZ4 313 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 MCEEQ96PE7 176 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 CHP1Q99653 195 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 RETREG1Q9H6L5 497 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 WDCPQ9H6R7 721 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 NHEJ1Q9H9Q4 299 aaPredicted RBP12.33□□□□□ -0.44
PFDN5-208ENST00000549995 ARHGEF4Q9NR80 690 aa12.33□□□□□ -0.44
PFDN5-208ENST00000549995 DNAJC17Q9NVM6 304 aaKnown RBP12.33□□□□□ -0.44
PFDN5-208ENST00000549995 ZNHIT6Q9NWK9 470 aaKnown RBP12.33□□□□□ -0.44
PFDN5-208ENST00000549995 IMPACTQ9P2X3 320 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms