RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 IFNB1P01574 187 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 GSTA1P08263 222 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 ALADP13716 330 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 FGFR3P22607 806 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 ELK3P41970 407 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 PITX1P78337 314 aaPredicted RBP10.3□□□□□ -0.76
RAB5B-206ENST00000549505 CDK18Q07002 472 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 CCDC15Q0P6D6 951 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 ARHGEF6Q15052 776 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 DEFB115Q30KQ5 88 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 ARL13BQ3SXY8 428 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 NOMO2Q5JPE7 1267 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 ANKRD20A2Q5SQ80 823 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 ANKRD20A1Q5TYW2 823 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 C1orf53Q5VUE5 145 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 ANKRD20A3Q5VUR7 823 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 C3orf62Q6ZUJ4 267 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 CHSY1Q86X52 802 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 CCT6BQ92526 530 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 TTC17Q96AE7 1141 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 SPATA17Q96L03 361 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 GLT1D1Q96MS3 346 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 PPP1R2P1Q96PQ5 205 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 GORASP1Q9BQQ3 440 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 CENPHQ9H3R5 247 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 ABCC13Q9NSE7 274 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 FAM169AQ9Y6X4 670 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 TCRBV9S1A1TA0A576 114 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 AP3B1O00203 1094 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 KLF11O14901 512 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 MFSD11O43934 449 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 CTSHP09668 335 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 WDR4P57081 412 aaKnown RBP10.3□□□□□ -0.76
RAB5B-206ENST00000549505 PDK4Q16654 411 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 GKAP1Q5VSY0 366 aaPredicted RBP10.3□□□□□ -0.76
RAB5B-206ENST00000549505 OVOS1Q6IE37 1185 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 FAM126BQ8IXS8 530 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 ZNF683Q8IZ20 524 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 FBF1Q8TES7 1133 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 MED10Q9BTT4 135 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 NSRP1Q9H0G5 558 aaKnown RBP10.3□□□□□ -0.76
RAB5B-206ENST00000549505 RAB6BQ9NRW1 208 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 HSFX1Q9UBD0 423 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 STARD13Q9Y3M8 1113 aa10.3□□□□□ -0.76
RAB5B-206ENST00000549505 OR6C75A6NL08 312 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 DNM1LO00429 736 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 SNX3O60493 162 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 ELNP15502 786 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 SELPP16109 830 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 AMPD1P23109 780 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 SLCO1A2P46721 670 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 NIPAL4Q0D2K0 466 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 MARK2Q7KZI7 788 aaKnown RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 ZC3H18Q86VM9 953 aaKnown RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 RNF168Q8IYW5 571 aaPredicted RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 ARHGAP18Q8N392 663 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 LZTR1Q8N653 840 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 ZNF398Q8TD17 642 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 SLC39A13Q96H72 371 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 KCNK16Q96T55 309 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 PAFAH2Q99487 392 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 PRMT1Q99873 361 aaKnown RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 MCMBPQ9BTE3 642 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 TRABDQ9H4I3 376 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 C10orf88Q9H8K7 445 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 ACTR5Q9H9F9 607 aaPredicted RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 CASTOR2A6NHX0 329 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 EEF2KO00418 725 aaKnown RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 FGF10O15520 208 aaPredicted RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 IRAK2O43187 625 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 CREB1P16220 341 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 TAC1P20366 129 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 MX2P20592 715 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 ETV4P43268 484 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 PSEN1P49768 467 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 CSRP3P50461 194 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 SARNPP82979 210 aaKnown RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 PKN2Q16513 984 aaKnown RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 NUGGCQ68CJ6 796 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 HEATR6Q6AI08 1181 aaKnown RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 TTC19Q6DKK2 380 aaPredicted RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 GLB1LQ6UWU2 654 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 SLC26A11Q86WA9 606 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 FAM131BQ86XD5 332 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 DCP1BQ8IZD4 617 aaKnown RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 PYROXD2Q8N2H3 581 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 RAB3IL1Q8TBN0 382 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 URGCPQ8TCY9 931 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 VPS11Q9H270 941 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 PPANQ9NQ55 473 aaKnown RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 PPARGC1AQ9UBK2 798 aaKnown RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 RASA4BC9J798 803 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 PSMD3O43242 534 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 RASA4O43374 803 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 B4GALT3O60512 393 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 AOC2O75106 756 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 STK10O94804 968 aaKnown RBP10.29□□□□□ -0.76
RAB5B-206ENST00000549505 DDHD2O94830 711 aa10.29□□□□□ -0.76
RAB5B-206ENST00000549505 APOEP02649 317 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms