RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TXNDC5Q8NBS9 432 aaKnown RBP19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 RNF214Q8ND24 703 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 OLIG1Q8TAK6 271 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 KCNV2Q8TDN2 545 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 RNF34Q969K3 372 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 NT5C3BQ969T7 300 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 MYEOVQ96EZ4 313 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 BTN2A3PQ96KV6 586 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 SLC2A11Q9BYW1 496 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 IRX2Q9BZI1 471 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 ADAM22Q9P0K1 906 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 STAP1Q9ULZ2 295 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 MMP17Q9ULZ9 603 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 MYO18AQ92614 2054 aaKnown RBP19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 DMDP11532 3685 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 TBL1XO60907 577 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 LILRB5O75023 590 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 TNFAIP3P21580 790 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 SULT1E1P49888 294 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 GEN1Q17RS7 908 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 SLC25A52Q3SY17 297 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 MS4A13Q5J8X5 152 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 MPP7Q5T2T1 576 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 TRNP1Q6NT89 227 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 ARCQ7LC44 396 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 CAMKK1Q8N5S9 505 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 NKD2Q969F2 451 aaPredicted RBP19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 PRICKLE1Q96MT3 831 aaPredicted RBP19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 HHIPQ96QV1 700 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 XPO4Q9C0E2 1151 aaKnown RBP19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 HAUS4Q9H6D7 363 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 METTL5Q9NRN9 209 aaKnown RBP19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 SLC12A6Q9UHW9 1150 aa19.42■□□□□ 0.7
PRPF40B-206ENST00000547764 A0A1W2PQJ5 194 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 SGK1O00141 431 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 ADAM23O75077 832 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 ABCB4P21439 1286 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 TACR2P21452 398 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 PRKCIP41743 596 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 PXNP49023 591 aaPredicted RBP19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 RPS24P62847 133 aaKnown RBP19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 CRY1Q16526 586 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 EGFLAMQ63HQ2 1017 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 RAP1GAP2Q684P5 730 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 RNF43Q68DV7 783 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 LONP2Q86WA8 852 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 EMC1Q8N766 993 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 HJURPQ8NCD3 748 aaPredicted RBP19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 PGAP3Q96FM1 320 aaPredicted RBP19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 TBCBQ99426 244 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 SEMA4AQ9H3S1 761 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 PIGVQ9NUD9 493 aa19.41■□□□□ 0.7
PRPF40B-206ENST00000547764 CALB1P05937 261 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 TPM3P06753 285 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 HNRNPLP14866 589 aaKnown RBP eCLIP19.4■□□□□ 0.75e-8■■■■■ 61.7
PRPF40B-206ENST00000547764 HLA-FP30511 346 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 CXCR3P49682 368 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 MRE11P49959 708 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 GSCP56915 257 aaPredicted RBP19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 EOGTQ5NDL2 527 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 ACAD10Q6JQN1 1059 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 TMEM92Q6UXU6 159 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 MON1BQ7L1V2 547 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 ZNF571Q7Z3V5 609 aaPredicted RBP19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 TRMT11Q7Z4G4 463 aaKnown RBP19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 ANKS1BQ7Z6G8 1248 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 ALYREFQ86V81 257 aaKnown RBP19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 WDR5BQ86VZ2 330 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 CHSY1Q86X52 802 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 LGI2Q8N0V4 545 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 CPLX3Q8WVH0 158 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 CFAP57Q96MR6 1250 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 ACOX2Q99424 681 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 PRMT1Q99873 361 aaKnown RBP19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 STIM2Q9P246 746 aa19.4■□□□□ 0.7
PRPF40B-206ENST00000547764 GJB6O95452 261 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 APBB3O95704 486 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 F9P00740 461 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 SKILP12757 684 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 DGKEP52429 567 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 DEUP1Q05D60 604 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 C1QBPQ07021 282 aaKnown RBP19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 KLHL30Q0D2K2 578 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 TMEM215Q68D42 235 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 SND1Q7KZF4 910 aaKnown RBP eCLIP19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 BNIPLQ7Z465 357 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 CFAP52Q8N1V2 620 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 TSTD1Q8NFU3 115 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 JOSD2Q8TAC2 188 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 WFDC5Q8TCV5 224 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 IQCDQ96DY2 449 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 WDCPQ9H6R7 721 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 TAS2R14Q9NYV8 317 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 CAPN11Q9UMQ6 739 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 PIEZO1Q92508 2521 aa19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 ZFHX2Q9C0A1 2572 aaPredicted RBP19.39■□□□□ 0.69
PRPF40B-206ENST00000547764 CCDC163A0A0D9SF12 145 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 TYW5A2RUC4 315 aaKnown RBP19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 F5H5T6 163 aa19.38■□□□□ 0.69
PRPF40B-206ENST00000547764 CBFA2T2O43439 604 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms