RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 NCBP2-AS2Q69YL0 99 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 RNF19BQ6ZMZ0 732 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 ARHGEF18Q6ZSZ5 1173 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 SCD5Q86SK9 330 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 VPS52Q8N1B4 723 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 COLGALT1Q8NBJ5 622 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 EXOC4Q96A65 974 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 ATP6V1G3Q96LB4 118 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 PGLYRP2Q96PD5 576 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 TTLL2Q9BWV7 592 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 SEMA4AQ9H3S1 761 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 TMBIM4Q9HC24 238 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 MRPL17Q9NRX2 175 aaKnown RBP13.88□□□□□ -0.19
PTCH1-215ENST00000547672 DTLQ9NZJ0 730 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 UXTQ9UBK9 157 aaPredicted RBP13.88□□□□□ -0.19
PTCH1-215ENST00000547672 TRHDEQ9UKU6 1024 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 INSL6Q9Y581 213 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 NFS1Q9Y697 457 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 TET1Q8NFU7 2136 aa13.88□□□□□ -0.19
PTCH1-215ENST00000547672 A0A087WUV0 522 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-215ENST00000547672 TRIM43BA6NCK2 446 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 PSMD3O43242 534 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 SPAG6O75602 509 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 TCEA3O75764 348 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 ERCC2P18074 760 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 RBL1P28749 1068 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 EPHB2P29323 1055 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 MAGEA6P43360 314 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 TBX4P57082 545 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 RING1Q06587 406 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 RAB33AQ14088 237 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 SLC29A2Q14542 456 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 TRIP4Q15650 581 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-215ENST00000547672 UAP1Q16222 522 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-215ENST00000547672 KRT71Q3SY84 523 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 DNAJC21Q5F1R6 531 aaKnown RBP13.87□□□□□ -0.19
PTCH1-215ENST00000547672 NPNTQ6UXI9 565 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 FIBCD1Q8N539 461 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 CCNYQ8ND76 341 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 MCUQ8NE86 351 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 ADAM32Q8TC27 787 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 HTR3CQ8WXA8 447 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 TRIM43Q96BQ3 446 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-215ENST00000547672 LRRC39Q96DD0 335 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 TBC1D31Q96DN5 1066 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 PGM2Q96G03 612 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 SERPINB12Q96P63 405 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 OLFM3Q96PB7 478 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 ADAM33Q9BZ11 813 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 HBS1LQ9Y450 684 aaKnown RBP13.87□□□□□ -0.19
PTCH1-215ENST00000547672 FARP1Q9Y4F1 1045 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-215ENST00000547672 CLUHO75153 1309 aa13.87□□□□□ -0.19
PTCH1-215ENST00000547672 SLC38A8A6NNN8 435 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 E7EVH7 732 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 H3BQF6 201 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 RASGRF2O14827 1237 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 DCLK1O15075 740 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 ABLIM3O94929 683 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 GSTA2P09210 222 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 ZSCAN5DPP0CG00 497 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 HOXD11P31277 338 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-215ENST00000547672 EPHB3P54753 998 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 MLLT6P55198 1093 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-215ENST00000547672 PITX1P78337 314 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-215ENST00000547672 BASP1P80723 227 aaKnown RBP13.86□□□□□ -0.19
PTCH1-215ENST00000547672 FPGSQ05932 587 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 ZNF844Q08AG5 666 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 TAF10Q12962 218 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 NR1H3Q13133 447 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 PARP6Q2NL67 630 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 EMC10Q5UCC4 262 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 SNX30Q5VWJ9 437 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 NUGGCQ68CJ6 796 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 PSRC1Q6PGN9 363 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-215ENST00000547672 KLHDC10Q6PID8 442 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 TAS1R1Q7RTX1 841 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 ITIH5Q86UX2 942 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 PYROXD2Q8N2H3 581 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 RIBC1Q8N443 379 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-215ENST00000547672 NAT8LQ8N9F0 302 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 PHOSPHO2Q8TCD6 241 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 PYROXD1Q8WU10 500 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 PRCCQ92733 491 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-215ENST00000547672 BTN2A3PQ96KV6 586 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 ZBED2Q9BTP6 218 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 CDC42EP4Q9H3Q1 356 aaKnown RBP13.86□□□□□ -0.19
PTCH1-215ENST00000547672 XAB2Q9HCS7 855 aaKnown RBP13.86□□□□□ -0.19
PTCH1-215ENST00000547672 SAYSD1Q9NPB0 183 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 RAB6BQ9NRW1 208 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 PSD3Q9NYI0 1048 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 MARCH2Q9P0N8 246 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 CALCOCO1Q9P1Z2 691 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 XPO7Q9UIA9 1087 aaKnown RBP13.86□□□□□ -0.19
PTCH1-215ENST00000547672 ADAM21Q9UKJ8 722 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 SLC27A5Q9Y2P5 690 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 RWDD3Q9Y3V2 267 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 ASB3Q9Y575 518 aa13.86□□□□□ -0.19
PTCH1-215ENST00000547672 A0A0A0MRY4 1105 aa13.85□□□□□ -0.19
PTCH1-215ENST00000547672 ERI2A8K979 691 aaKnown RBP13.85□□□□□ -0.19
PTCH1-215ENST00000547672 KCNU1A8MYU2 1149 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms