RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 FAM160B1Q5W0V3 765 aa13.05□□□□□ -0.32
CACNB3-204ENST00000547230 CASC4Q6P4E1 433 aa13.05□□□□□ -0.32
CACNB3-204ENST00000547230 FBXW8Q8N3Y1 598 aa13.05□□□□□ -0.32
CACNB3-204ENST00000547230 ZNF280CQ8ND82 737 aa13.05□□□□□ -0.32
CACNB3-204ENST00000547230 PPP4R1Q8TF05 950 aa13.05□□□□□ -0.32
CACNB3-204ENST00000547230 JDP2Q8WYK2 163 aa13.05□□□□□ -0.32
CACNB3-204ENST00000547230 CMTM5Q96DZ9 223 aa13.05□□□□□ -0.32
CACNB3-204ENST00000547230 NLRP4Q96MN2 994 aa13.05□□□□□ -0.32
CACNB3-204ENST00000547230 OXCT2Q9BYC2 517 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-204ENST00000547230 INO80BQ9C086 356 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-204ENST00000547230 TMEM216Q9P0N5 145 aa13.05□□□□□ -0.32
CACNB3-204ENST00000547230 FZD1Q9UP38 647 aa13.05□□□□□ -0.32
CACNB3-204ENST00000547230 C15orf38-AP3S2A0A0A6YYH1 394 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 ZBTB42B2RXF5 422 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 ACKR2O00590 384 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 DCXO43602 365 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 ZBTB14O43829 449 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 IL18RAPO95256 599 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 APBA3O96018 575 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 VAV1P15498 845 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 CHN2P52757 468 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 NDST1P52848 882 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 ABCE1P61221 599 aaKnown RBP13.04□□□□□ -0.32
CACNB3-204ENST00000547230 MXD4Q14582 209 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-204ENST00000547230 KCNT2Q6UVM3 1135 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 OLFML1Q6UWY5 402 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 C4orf22Q6V702 233 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 ARPINQ7Z6K5 226 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 SDCCAG8Q86SQ7 713 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-204ENST00000547230 KBTBD6Q86V97 674 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 SPATA24Q86W54 205 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 RTKN2Q8IZC4 609 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 OPTNQ96CV9 577 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 DTNBP1Q96EV8 351 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 CLMNQ96JQ2 1002 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 QKIQ96PU8 341 aaKnown RBP eCLIP13.04□□□□□ -0.32
CACNB3-204ENST00000547230 RNPEPQ9H4A4 650 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 MINDY3Q9H8M7 445 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 MFHAS1Q9Y4C4 1052 aa13.04□□□□□ -0.32
CACNB3-204ENST00000547230 CAPN8A6NHC0 703 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 GPR25O00155 361 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 MDM4O15151 490 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 PEX10O60683 326 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 PGM3O95394 542 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 MYL4P12829 197 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 COX4I1P13073 169 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 SDC4P31431 198 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 HARS2P49590 506 aaKnown RBP13.03□□□□□ -0.32
CACNB3-204ENST00000547230 MTTPP55157 894 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 HDAC4P56524 1084 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 FOLH1Q04609 750 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 DEUP1Q05D60 604 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 ITGA9Q13797 1035 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 NBPF12Q5TAG4 269 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-204ENST00000547230 OGFRL1Q5TC84 451 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-204ENST00000547230 MAP3K21Q5TCX8 1036 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 LCLAT1Q6UWP7 414 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 CYS1Q717R9 158 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 TMC7Q7Z402 723 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 NIM1KQ8IY84 436 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 C12orf29Q8N999 325 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.32
CACNB3-204ENST00000547230 GCNAQ96QF7 691 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 TBCBQ99426 244 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 GCOM2Q9BZD3 368 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-204ENST00000547230 C2orf40Q9H1Z8 148 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 FZD8Q9H461 694 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 IFT122Q9HBG6 1241 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 ZNF358Q9NW07 568 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 COPG2Q9UBF2 871 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 PACSIN3Q9UKS6 424 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 INPP5FQ9Y2H2 1132 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 PEX1O43933 1283 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 ITGA2BP08514 1039 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 RALBP11234 206 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 CD1EP15812 388 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 PTPRAP18433 802 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 GRK2P25098 689 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 ATXN1P54253 815 aaKnown RBP13.03□□□□□ -0.32
CACNB3-204ENST00000547230 SNAPC2Q13487 334 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 TNFAIP1Q13829 316 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 TLR1Q15399 786 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 STILQ15468 1287 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 GOLGA7BQ2TAP0 167 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 PMF1Q6P1K2 205 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 ICA1LQ8NDH6 482 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 TRAPPC12Q8WVT3 735 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 ATP2A3Q93084 1043 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 NMD3Q96D46 503 aaKnown RBP13.03□□□□□ -0.32
CACNB3-204ENST00000547230 BTBD9Q96Q07 612 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 FAM96AQ9H5X1 160 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 CYP3A43Q9HB55 503 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 MAN1C1Q9NR34 630 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 MTMR10Q9NXD2 777 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 DCDC2Q9UHG0 476 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 DTNAQ9Y4J8 743 aa13.03□□□□□ -0.32
CACNB3-204ENST00000547230 SMIM31A0A1B0GVY4 71 aa13.02□□□□□ -0.32
CACNB3-204ENST00000547230 SPDYE16A6NNV3 312 aaPredicted RBP13.02□□□□□ -0.32
CACNB3-204ENST00000547230 E9PBE3 544 aa13.02□□□□□ -0.32
CACNB3-204ENST00000547230 KLHL41O60662 606 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms