RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CSH2P0DML3 217 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 LPIN1Q14693 890 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 KLHL38Q2WGJ6 581 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 CDHR3Q6ZTQ4 885 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 CEP128Q6ZU80 1094 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 NDUFAF2Q8N183 169 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 PTPRN2Q92932 1015 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 ZNF670Q9BS34 389 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 SLC38A7Q9NVC3 462 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 TTC24A2A3L6 582 aaPredicted RBP13.11□□□□□ -0.31
SCAF11-209ENST00000547018 CA12O43570 354 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 FYNP06241 537 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 CYBAP13498 195 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 TGM2P21980 687 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 TARSP26639 723 aaKnown RBP13.11□□□□□ -0.31
SCAF11-209ENST00000547018 ADRA1BP35368 520 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 SREBF2Q12772 1141 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 KCNJ11Q14654 390 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 FITM2Q8N6M3 262 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 KLHL29Q96CT2 875 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 ECT2Q9H8V3 914 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 SLC40A1Q9NP59 571 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 EFR3BQ9Y2G0 817 aa13.11□□□□□ -0.31
SCAF11-209ENST00000547018 STK10O94804 968 aaKnown RBP13.1□□□□□ -0.31
SCAF11-209ENST00000547018 SLC10A3P09131 477 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 CA8P35219 290 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 PTPN7P35236 360 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 KCNJ2P63252 427 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 PCSK7Q16549 785 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 DPYSL2Q16555 572 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 C6orf89Q6UWU4 347 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 ARHGAP36Q6ZRI8 547 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 RFX8Q6ZV50 586 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 SPATA2LQ8IUW3 424 aaPredicted RBP13.1□□□□□ -0.31
SCAF11-209ENST00000547018 TTC9BQ8N6N2 239 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 TOP6BLQ8N6T0 577 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 MOCOSQ96EN8 888 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 SENP6Q9GZR1 1112 aaPredicted RBP13.1□□□□□ -0.31
SCAF11-209ENST00000547018 CD248Q9HCU0 757 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 RPS6KL1Q9Y6S9 549 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 DAOAP59103 153 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 BTBD8Q5XKL5 378 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 SLC9A4Q6AI14 798 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 IL31Q6EBC2 164 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 OTOP3Q7RTS5 596 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 ABI1Q8IZP0 508 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 DCAKDQ8WVC6 231 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 ZNF75CPQ92670 426 aaPredicted RBP13.1□□□□□ -0.31
SCAF11-209ENST00000547018 CENPTQ96BT3 561 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 PPP1R36Q96LQ0 422 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 GLT1D1Q96MS3 346 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 VPS11Q9H270 941 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 FZD10Q9ULW2 581 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 IQANK1A0A1B0GTG1 560 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 TMEM88BA6NKF7 163 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 STAU1O95793 577 aaKnown RBP13.1□□□□□ -0.31
SCAF11-209ENST00000547018 PCSK1P29120 753 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 PTPN9P43378 593 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 PPM1JQ5JR12 505 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 TAC4Q86UU9 113 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 SERINC5Q86VE9 423 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 ZNF567Q8N184 647 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 NPWQ8N729 165 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 SPATA22Q8NHS9 363 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 CCT6BQ92526 530 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 MAGEB18Q96M61 343 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 COLEC11Q9BWP8 271 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 FNDC3AQ9Y2H6 1198 aaKnown RBP13.1□□□□□ -0.31
SCAF11-209ENST00000547018 TEX264Q9Y6I9 313 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 SIP14410 1827 aa13.1□□□□□ -0.31
SCAF11-209ENST00000547018 ZNF638Q14966 1978 aaKnown RBP13.09□□□□□ -0.31
SCAF11-209ENST00000547018 PMPCBO75439 489 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 ENDOD1O94919 500 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 CBX6O95503 412 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 ASMTLO95671 621 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 WARSP23381 471 aaKnown RBP13.09□□□□□ -0.31
SCAF11-209ENST00000547018 HNRNPH1P31943 449 aaKnown RBP13.09□□□□□ -0.31
SCAF11-209ENST00000547018 LHX1P48742 406 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 SP3Q02447 781 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 CERCAMQ5T4B2 595 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 BHMTQ93088 406 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 ZNF669Q96BR6 464 aaPredicted RBP13.09□□□□□ -0.31
SCAF11-209ENST00000547018 STAMBPL1Q96FJ0 436 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 TACO1Q9BSH4 297 aaKnown RBP13.09□□□□□ -0.31
SCAF11-209ENST00000547018 FOXP3Q9BZS1 431 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 SYBUQ9NX95 663 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 LGALS13Q9UHV8 139 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 PSAT1Q9Y617 370 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 A8MUI8 341 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 ZBTB24O43167 697 aaPredicted RBP13.09□□□□□ -0.31
SCAF11-209ENST00000547018 TADA2AO75478 443 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 LRIG2O94898 1065 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 SLC4A1P02730 911 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 ODC1P11926 461 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 CPA2P48052 419 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 TMPRSS15P98073 1019 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 TSPY1Q01534 308 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 YWHAHQ04917 246 aaPredicted RBP13.09□□□□□ -0.31
SCAF11-209ENST00000547018 TAZQ16635 292 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 UPP1Q16831 310 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms