RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 GEN1Q17RS7 908 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 PIK3R6Q5UE93 754 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 NADSYN1Q6IA69 706 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 TRIM72Q6ZMU5 477 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 ERICH1Q86X53 443 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.5■□□□□ 0.23
DDX54-204ENST00000546898 ATP6V0D2Q8N8Y2 350 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 HJURPQ8NCD3 748 aaPredicted RBP16.5■□□□□ 0.23
DDX54-204ENST00000546898 MDGA1Q8NFP4 955 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 BTN2A3PQ96KV6 586 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 TMEM51Q9NW97 253 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 SPTBN4Q9H254 2564 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 TCRBV21S2A2A0A5A6 115 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 LRP3O75074 770 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 GRAP2O75791 330 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 MOCS2O96007 188 aaPredicted RBP16.49■□□□□ 0.23
DDX54-204ENST00000546898 PITX1P78337 314 aaPredicted RBP16.49■□□□□ 0.23
DDX54-204ENST00000546898 IQCB1Q15051 598 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 LPAL2Q16609 132 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 FILIP1LQ4L180 1135 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 USP39Q53GS9 565 aaKnown RBP16.49■□□□□ 0.23
DDX54-204ENST00000546898 ZC3H12AQ5D1E8 599 aaKnown RBP16.49■□□□□ 0.23
DDX54-204ENST00000546898 RFWD3Q6PCD5 774 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 OLIG1Q8TAK6 271 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 NUP205Q92621 2012 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 LOXL4Q96JB6 756 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 ZC3H10Q96K80 434 aaKnown RBP16.49■□□□□ 0.23
DDX54-204ENST00000546898 TPSD1Q9BZJ3 242 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 RTN4Q9NQC3 1192 aaKnown RBP16.49■□□□□ 0.23
DDX54-204ENST00000546898 DDIT4Q9NX09 232 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 BCCIPQ9P287 314 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDX54-204ENST00000546898 THAP10Q9P2Z0 257 aaPredicted RBP16.49■□□□□ 0.23
DDX54-204ENST00000546898 SLC12A6Q9UHW9 1150 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 CLEC4EQ9ULY5 219 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 STAP1Q9ULZ2 295 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 CEP192Q8TEP8 1941 aa16.49■□□□□ 0.23
DDX54-204ENST00000546898 SDK1Q7Z5N4 2213 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 GOLGA6L7A0A1B0GV03 622 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 TIMM44O43615 452 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 TBL1XO60907 577 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 CAVIN2O95810 425 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 CYP1A1P04798 512 aaPredicted RBP16.48■□□□□ 0.23
DDX54-204ENST00000546898 ABCB4P21439 1286 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 HLA-FP30511 346 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 CCR1P32246 355 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 MATKP42679 507 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 SGSHP51688 502 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 FMO1Q01740 532 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 SKOR2Q2VWA4 1001 aaPredicted RBP16.48■□□□□ 0.23
DDX54-204ENST00000546898 MS4A13Q5J8X5 152 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 FAM102AQ5T9C2 384 aaPredicted RBP16.48■□□□□ 0.23
DDX54-204ENST00000546898 XYLT1Q86Y38 959 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 AHI1Q8N157 1196 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 DCLK2Q8N568 766 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 FAM160A2Q8N612 972 aaPredicted RBP16.48■□□□□ 0.23
DDX54-204ENST00000546898 SLC20A1Q8WUM9 679 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 PRICKLE1Q96MT3 831 aaPredicted RBP16.48■□□□□ 0.23
DDX54-204ENST00000546898 ACOX2Q99424 681 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 ELOVL2Q9NXB9 296 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.48■□□□□ 0.23
DDX54-204ENST00000546898 CEP250Q9BV73 2442 aa16.48■□□□□ 0.23
DDX54-204ENST00000546898 TNRC6BQ9UPQ9 1833 aaKnown RBP16.47■□□□□ 0.23
DDX54-204ENST00000546898 A0A1W2PQF6 199 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 KCNU1A8MYU2 1149 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 ZBTB24O43167 697 aaPredicted RBP16.47■□□□□ 0.23
DDX54-204ENST00000546898 CCDC172P0C7W6 258 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 TACR2P21452 398 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 WASP42768 502 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 TPM4P67936 248 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 ENPP2Q13822 863 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 BYSLQ13895 437 aaKnown RBP16.47■□□□□ 0.23
DDX54-204ENST00000546898 STARD3Q14849 445 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 ELF2Q15723 593 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 NAA35Q5VZE5 725 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 ARCQ7LC44 396 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 KIAA0907Q7Z7F0 614 aaPredicted RBP16.47■□□□□ 0.23
DDX54-204ENST00000546898 KBTBD6Q86V97 674 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 CHSY1Q86X52 802 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 MFN1Q8IWA4 741 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 CCDC117Q8IWD4 279 aaPredicted RBP16.47■□□□□ 0.23
DDX54-204ENST00000546898 ABCA7Q8IZY2 2146 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 HMGB4Q8WW32 186 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 SPACA7Q96KW9 195 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 NPY6RQ99463 290 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 CIPCQ9C0C6 399 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 NUCKS1Q9H1E3 243 aaKnown RBP16.47■□□□□ 0.23
DDX54-204ENST00000546898 CD248Q9HCU0 757 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 ABCB8Q9NUT2 735 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 CACNA2D2Q9NY47 1150 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 GGA2Q9UJY4 613 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 MYO6Q9UM54 1294 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 STON1Q9Y6Q2 735 aa16.47■□□□□ 0.23
DDX54-204ENST00000546898 NYNRINQ9P2P1 1898 aaKnown RBP16.46■□□□□ 0.23
DDX54-204ENST00000546898 A0A1B0GTH6 734 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 A0A1W2PQC6 194 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 F5H5T6 163 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 TEX33O43247 280 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 RHOBTB1O94844 696 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 EPN2O95208 641 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 PABPC1P11940 636 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms