RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 OR10T2Q8NGX3 314 aa8.82□□□□□ -1
VPS29-203ENST00000546588 OR6P1Q8NGX9 317 aa8.82□□□□□ -1
VPS29-203ENST00000546588 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.82□□□□□ -1
VPS29-203ENST00000546588 SLC2A14Q8TDB8 520 aa8.82□□□□□ -1
VPS29-203ENST00000546588 C2orf15Q8WU43 125 aaKnown RBP8.82□□□□□ -1
VPS29-203ENST00000546588 NUDT8Q8WV74 236 aa8.82□□□□□ -1
VPS29-203ENST00000546588 NT5C3BQ969T7 300 aa8.82□□□□□ -1
VPS29-203ENST00000546588 SMARCD1Q96GM5 515 aa8.82□□□□□ -1
VPS29-203ENST00000546588 PCED1BQ96HM7 432 aa8.82□□□□□ -1
VPS29-203ENST00000546588 PBKQ96KB5 322 aa8.82□□□□□ -1
VPS29-203ENST00000546588 MYCBPQ99417 103 aaPredicted RBP8.82□□□□□ -1
VPS29-203ENST00000546588 LPIN3Q9BQK8 851 aa8.82□□□□□ -1
VPS29-203ENST00000546588 COLEC11Q9BWP8 271 aa8.82□□□□□ -1
VPS29-203ENST00000546588 B3GNT5Q9BYG0 378 aa8.82□□□□□ -1
VPS29-203ENST00000546588 ZFP64Q9NPA5 681 aa8.82□□□□□ -1
VPS29-203ENST00000546588 KLHL42Q9P2K6 505 aa8.82□□□□□ -1
VPS29-203ENST00000546588 HESX1Q9UBX0 185 aa8.82□□□□□ -1
VPS29-203ENST00000546588 IP6K2Q9UHH9 426 aa8.82□□□□□ -1
VPS29-203ENST00000546588 AMFRQ9UKV5 643 aa8.82□□□□□ -1
VPS29-203ENST00000546588 PCDHA3Q9Y5H8 950 aa8.82□□□□□ -1
VPS29-203ENST00000546588 FAM92AA1XBS5 289 aa8.81□□□□□ -1
VPS29-203ENST00000546588 MYBPHLA2RUH7 354 aa8.81□□□□□ -1
VPS29-203ENST00000546588 C2CD4BA6NLJ0 364 aa8.81□□□□□ -1
VPS29-203ENST00000546588 E5RJQ4 531 aa8.81□□□□□ -1
VPS29-203ENST00000546588 F8W810 466 aa8.81□□□□□ -1
VPS29-203ENST00000546588 MYO1FO00160 1098 aa8.81□□□□□ -1
VPS29-203ENST00000546588 PAPSS1O43252 624 aaPredicted RBP8.81□□□□□ -1
VPS29-203ENST00000546588 TADA3O75528 432 aa8.81□□□□□ -1
VPS29-203ENST00000546588 URI1O94763 535 aaPredicted RBP8.81□□□□□ -1
VPS29-203ENST00000546588 FBXO21O94952 628 aa8.81□□□□□ -1
VPS29-203ENST00000546588 GJB5O95377 273 aa8.81□□□□□ -1
VPS29-203ENST00000546588 ALDH2P05091 517 aa8.81□□□□□ -1
VPS29-203ENST00000546588 H2AFB1P0C5Y9 115 aa8.81□□□□□ -1
VPS29-203ENST00000546588 H2AFB2P0C5Z0 115 aa8.81□□□□□ -1
VPS29-203ENST00000546588 IMPDH2P12268 514 aa8.81□□□□□ -1
VPS29-203ENST00000546588 RAG1P15918 1043 aa8.81□□□□□ -1
VPS29-203ENST00000546588 EN2P19622 333 aaPredicted RBP8.81□□□□□ -1
VPS29-203ENST00000546588 COMTP21964 271 aa8.81□□□□□ -1
VPS29-203ENST00000546588 BDNFP23560 247 aa8.81□□□□□ -1
VPS29-203ENST00000546588 PCK1P35558 622 aa8.81□□□□□ -1
VPS29-203ENST00000546588 PTPN9P43378 593 aa8.81□□□□□ -1
VPS29-203ENST00000546588 NOP2P46087 812 aaKnown RBP8.81□□□□□ -1
VPS29-203ENST00000546588 BCAR1P56945 870 aa8.81□□□□□ -1
VPS29-203ENST00000546588 PSMC1P62191 440 aaKnown RBP8.81□□□□□ -1
VPS29-203ENST00000546588 RPL7AP62424 266 aaKnown RBP8.81□□□□□ -1
VPS29-203ENST00000546588 OGDHQ02218 1023 aa8.81□□□□□ -1
VPS29-203ENST00000546588 CKAP4Q07065 602 aaKnown RBP8.81□□□□□ -1
VPS29-203ENST00000546588 ADCY1Q08828 1119 aa8.81□□□□□ -1
VPS29-203ENST00000546588 ADGRE1Q14246 886 aa8.81□□□□□ -1
VPS29-203ENST00000546588 RNF187Q5TA31 235 aaPredicted RBP8.81□□□□□ -1
VPS29-203ENST00000546588 LCE3BQ5TA77 95 aa8.81□□□□□ -1
VPS29-203ENST00000546588 DCAF12L1Q5VU92 463 aa8.81□□□□□ -1
VPS29-203ENST00000546588 PM20D1Q6GTS8 502 aa8.81□□□□□ -1
VPS29-203ENST00000546588 SLC8B1Q6J4K2 584 aa8.81□□□□□ -1
VPS29-203ENST00000546588 DNAJC24Q6P3W2 148 aa8.81□□□□□ -1
VPS29-203ENST00000546588 FUT10Q6P4F1 479 aa8.81□□□□□ -1
VPS29-203ENST00000546588 TXNDC11Q6PKC3 985 aa8.81□□□□□ -1
VPS29-203ENST00000546588 VSTM1Q6UX27 236 aa8.81□□□□□ -1
VPS29-203ENST00000546588 FAM183BPQ6ZVS7 135 aa8.81□□□□□ -1
VPS29-203ENST00000546588 C16orf59Q7L2K0 433 aa8.81□□□□□ -1
VPS29-203ENST00000546588 BHLHA9Q7RTU4 235 aa8.81□□□□□ -1
VPS29-203ENST00000546588 PEX26Q7Z412 305 aa8.81□□□□□ -1
VPS29-203ENST00000546588 DEFB128Q7Z7B8 93 aa8.81□□□□□ -1
VPS29-203ENST00000546588 LSRQ86X29 649 aaPredicted RBP8.81□□□□□ -1
VPS29-203ENST00000546588 SLC39A11Q8N1S5 342 aa8.81□□□□□ -1
VPS29-203ENST00000546588 RNF169Q8NCN4 708 aa8.81□□□□□ -1
VPS29-203ENST00000546588 FAM71BQ8TC56 605 aa8.81□□□□□ -1
VPS29-203ENST00000546588 PHOSPHO2Q8TCD6 241 aa8.81□□□□□ -1
VPS29-203ENST00000546588 HERVK_113Q902F9 699 aa8.81□□□□□ -1
VPS29-203ENST00000546588 RUBCNQ92622 972 aa8.81□□□□□ -1
VPS29-203ENST00000546588 CENPIQ92674 756 aaPredicted RBP8.81□□□□□ -1
VPS29-203ENST00000546588 ALG3Q92685 438 aa8.81□□□□□ -1
VPS29-203ENST00000546588 FAM193BQ96PV7 902 aaPredicted RBP8.81□□□□□ -1
VPS29-203ENST00000546588 SMOQ99835 787 aa8.81□□□□□ -1
VPS29-203ENST00000546588 NCAPGQ9BPX3 1015 aa8.81□□□□□ -1
VPS29-203ENST00000546588 GPR62Q9BZJ7 368 aa8.81□□□□□ -1
VPS29-203ENST00000546588 TNKS2Q9H2K2 1166 aa8.81□□□□□ -1
VPS29-203ENST00000546588 CNGB3Q9NQW8 809 aa8.81□□□□□ -1
VPS29-203ENST00000546588 FAM49BQ9NUQ9 324 aa8.81□□□□□ -1
VPS29-203ENST00000546588 TMEM30AQ9NV96 361 aa8.81□□□□□ -1
VPS29-203ENST00000546588 IL37Q9NZH6 218 aa8.81□□□□□ -1
VPS29-203ENST00000546588 MTRRQ9UBK8 725 aa8.81□□□□□ -1
VPS29-203ENST00000546588 TJP2Q9UDY2 1190 aa8.81□□□□□ -1
VPS29-203ENST00000546588 PUF60Q9UHX1 559 aaKnown RBP8.81□□□□□ -1
VPS29-203ENST00000546588 BACE2Q9Y5Z0 518 aa8.81□□□□□ -1
VPS29-203ENST00000546588 SCO2A0A1W2PP80 73 aa8.8□□□□□ -1
VPS29-203ENST00000546588 TBKBP1A7MCY6 615 aa8.8□□□□□ -1
VPS29-203ENST00000546588 ZNF487B1APH4 448 aa8.8□□□□□ -1
VPS29-203ENST00000546588 TULP2O00295 520 aa8.8□□□□□ -1
VPS29-203ENST00000546588 SOX1O00570 391 aaPredicted RBP8.8□□□□□ -1
VPS29-203ENST00000546588 SART1O43290 800 aaKnown RBP8.8□□□□□ -1
VPS29-203ENST00000546588 ATP2C2O75185 946 aa8.8□□□□□ -1
VPS29-203ENST00000546588 ENDOD1O94919 500 aa8.8□□□□□ -1
VPS29-203ENST00000546588 FTCDO95954 541 aa8.8□□□□□ -1
VPS29-203ENST00000546588 C1RP00736 705 aa8.8□□□□□ -1
VPS29-203ENST00000546588 GSTP1P09211 210 aaKnown RBP8.8□□□□□ -1
VPS29-203ENST00000546588 KRT3P12035 628 aa8.8□□□□□ -1
VPS29-203ENST00000546588 CCDC130P13994 396 aa8.8□□□□□ -1
VPS29-203ENST00000546588 LAG3P18627 525 aa8.8□□□□□ -1
VPS29-203ENST00000546588 OR1G1P47890 313 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms