RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 SIN3BO75182 1162 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 WFS1O76024 890 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 RGS20O76081 388 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 SLC4A1P02730 911 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 TFPTP0C1Z6 253 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 VCLP18206 1134 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 TCF7P36402 384 aaPredicted RBP15.09■□□□□ 0.01
HOXC11-202ENST00000546378 STAT5BP51692 787 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 CDH15P55291 814 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 HSP90AA5PQ58FG0 334 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 MTHFD1LQ6UB35 978 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 DHDDSQ86SQ9 333 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 TRIML2Q8N7C3 387 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 ATP2A3Q93084 1043 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 AGAP2Q99490 1192 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 CGRRF1Q99675 332 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 VCX3AQ9NNX9 186 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 ARHGEF4Q9NR80 690 aa15.09■□□□□ 0.01
HOXC11-202ENST00000546378 GRIA2P42262 883 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 RALGDSQ12967 914 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 FAM183BPQ6ZVS7 135 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 VSIG10LQ86VR7 867 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 ZNF354CQ86Y25 554 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 ZNF781Q8N8C0 355 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 GRIN3AQ8TCU5 1115 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 SLC45A3Q96JT2 553 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 TRPV6Q9H1D0 765 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 DDX56Q9NY93 547 aaKnown RBP15.08■□□□□ 0
HOXC11-202ENST00000546378 GTSE1Q9NYZ3 720 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 TCEA3O75764 348 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 TM7SF2O76062 418 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 SDC4P31431 198 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 SFNP31947 248 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 MAP7Q14244 749 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 FLOT2Q14254 428 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 NPAS2Q99743 824 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 RPF1Q9H9Y2 349 aaKnown RBP15.08■□□□□ 0
HOXC11-202ENST00000546378 ZNF212Q9UDV6 495 aa15.08■□□□□ 0
HOXC11-202ENST00000546378 C15orf38-AP3S2A0A0A6YYH1 394 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 CLPTM1O96005 669 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 MX2P20592 715 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 GARTP22102 1010 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 NDST1P52848 882 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 ART3Q13508 389 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 KCTD2Q14681 263 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 XKR3Q5GH77 459 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 TRIM72Q6ZMU5 477 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 MARK2Q7KZI7 788 aaKnown RBP15.07■□□□□ 0
HOXC11-202ENST00000546378 ARPINQ7Z6K5 226 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 REPS2Q8NFH8 660 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 C12orf42Q96LP6 360 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 LENG8Q96PV6 779 aaPredicted RBP15.07■□□□□ 0
HOXC11-202ENST00000546378 OR52B2Q96RD2 323 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 SPATA16Q9BXB7 569 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 SDCBP2Q9H190 292 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 ANKEF1Q9NU02 776 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 TSPAN16Q9UKR8 245 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 GREB1LQ9C091 1923 aaPredicted RBP15.07■□□□□ 0
HOXC11-202ENST00000546378 MAGEB2O15479 319 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 STXBP2Q15833 593 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 SLC9B1Q4ZJI4 515 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 LBX2Q6XYB7 198 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 ASNSD1Q9NWL6 643 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 FAF1Q9UNN5 650 aaPredicted RBP15.07■□□□□ 0
HOXC11-202ENST00000546378 AURKCQ9UQB9 309 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 FARP1Q9Y4F1 1045 aaPredicted RBP15.07■□□□□ 0
HOXC11-202ENST00000546378 APOC4-APOC2K7ER74 178 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 DNAJA2O60884 412 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 APOEP02649 317 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 APOC2P02655 101 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 OATP04181 439 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 SRGAP2BP0DMP2 458 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 VAV1P15498 845 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 MPSTP25325 297 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 GOLGA7BQ2TAP0 167 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 NOL9Q5SY16 702 aaKnown RBP15.07■□□□□ 0
HOXC11-202ENST00000546378 BBS12Q6ZW61 710 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 ZNF677Q86XU0 584 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 ADGRF2Q8IZF7 708 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 PIWIL2Q8TC59 973 aaKnown RBP15.07■□□□□ 0
HOXC11-202ENST00000546378 PCDHAC1Q9H158 963 aa15.07■□□□□ 0
HOXC11-202ENST00000546378 ZNF646O15015 1829 aaPredicted RBP15.06■□□□□ 0
HOXC11-202ENST00000546378 CCL15-CCL14A0A0B4J2E2 113 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 RALBP11234 206 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 GOT1P17174 413 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 YWHAEP62258 255 aaKnown RBP15.06■□□□□ 0
HOXC11-202ENST00000546378 SLC25A11Q02978 314 aaKnown RBP15.06■□□□□ 0
HOXC11-202ENST00000546378 PTPN11Q06124 597 aaPredicted RBP15.06■□□□□ 0
HOXC11-202ENST00000546378 MYBPC2Q14324 1141 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 CCL15Q16663 113 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 TRMT5Q32P41 509 aaKnown RBP15.06■□□□□ 0
HOXC11-202ENST00000546378 PLD6Q8N2A8 252 aaKnown RBP15.06■□□□□ 0
HOXC11-202ENST00000546378 PARP8Q8N3A8 854 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 EME1Q96AY2 570 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 SLC39A3Q9BRY0 314 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 SNRNP25Q9BV90 132 aaKnown RBP15.06■□□□□ 0
HOXC11-202ENST00000546378 ELOVL4Q9GZR5 314 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 S100A14Q9HCY8 104 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 CYLDQ9NQC7 956 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 KLHL8Q9P2G9 620 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms