RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 NDE1Q9NXR1 346 aa12.15□□□□□ -0.47
CHERP-203ENST00000546361 PSD3Q9NYI0 1048 aa12.15□□□□□ -0.47
CHERP-203ENST00000546361 SPASTQ9UBP0 616 aa12.15□□□□□ -0.47
CHERP-203ENST00000546361 ZSCAN5CA6NGD5 496 aaPredicted RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 CLASP2O75122 1294 aaKnown RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 IGSF6O95976 241 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 APOA4P06727 396 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 SPATA31D3P0C874 917 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 PBLDP30039 288 aaPredicted RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 SGCGQ13326 291 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 TARBP2Q15633 366 aaKnown RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 HIST2H2ACQ16777 129 aaPredicted RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 SPDYE7PQ495Y7 208 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 TMEM259Q4ZIN3 620 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 HIST2H2AA3Q6FI13 130 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 FOXR2Q6PJQ5 311 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 SPATA31D4Q6ZUB0 917 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 DSG4Q86SJ6 1040 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 PRUNE1Q86TP1 453 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 PHACTR4Q8IZ21 702 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 EPS8L3Q8TE67 593 aaKnown RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 VAT1Q99536 393 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 MAGEB16A2A368 324 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 PDZK1P1A8MUH7 402 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 VAPBO95292 243 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 ENO1P06733 434 aaKnown RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 ENO3P13929 434 aaPredicted RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 POLR2EP19388 210 aaKnown RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 ERFP50548 548 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 ACLYP53396 1101 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 SEC24CP53992 1094 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 NPY5RQ15761 445 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 ERAP2Q6P179 960 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 MON1AQ86VX9 555 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 PIP4K2CQ8TBX8 421 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 PAFAH2Q99487 392 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 MRPL45Q9BRJ2 306 aaKnown RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 SNRNP25Q9BV90 132 aaKnown RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 EIF2AQ9BY44 585 aaKnown RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 SHCBP1LQ9BZQ2 653 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 CHST7Q9NS84 486 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 TRMT13Q9NUP7 481 aaKnown RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 RIC8BQ9NVN3 520 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 FAM153AQ9UHL3 310 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 FBXL21Q9UKT6 434 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 RUVBL2Q9Y230 463 aaKnown RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 USP15Q9Y4E8 981 aaPredicted RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 RPTORQ8N122 1335 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 TSPAN1O60635 241 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 GLRA3O75311 464 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 EPB42P16452 691 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 HSP90AA5PQ58FG0 334 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 LRRC8EQ6NSJ5 796 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 PKN3Q6P5Z2 889 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 MYO1HQ8N1T3 1032 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 ZNF557Q8N988 423 aaPredicted RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 TEKT4Q8WW24 435 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 ILKAPQ9H0C8 392 aaPredicted RBP12.14□□□□□ -0.47
CHERP-203ENST00000546361 MANSC1Q9H8J5 431 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 CYP4F12Q9HCS2 524 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 LNPEPQ9UIQ6 1025 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 RNF112Q9ULX5 631 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 DERAQ9Y315 318 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 PCDHGC5Q9Y5F6 944 aa12.14□□□□□ -0.47
CHERP-203ENST00000546361 FRMD3A2A2Y4 597 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 NCF1BA6NI72 391 aaPredicted RBP12.13□□□□□ -0.47
CHERP-203ENST00000546361 UNCXA6NJT0 531 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 NCF1CA8MVU1 366 aaPredicted RBP12.13□□□□□ -0.47
CHERP-203ENST00000546361 GLUD1P00367 558 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 NCF1P14598 390 aaPredicted RBP12.13□□□□□ -0.47
CHERP-203ENST00000546361 PECAM1P16284 738 aaPredicted RBP12.13□□□□□ -0.47
CHERP-203ENST00000546361 VCLP18206 1134 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 MMP13P45452 471 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 LRRC74AQ0VAA2 488 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 RFX8Q6ZV50 586 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 RD3Q7Z3Z2 195 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 DENND1CQ8IV53 801 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 KATNAL2Q8IYT4 538 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 C1orf127Q8N9H9 656 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 LNX1Q8TBB1 728 aaPredicted RBP12.13□□□□□ -0.47
CHERP-203ENST00000546361 DUSP16Q9BY84 665 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 ST6GALNAC4Q9H4F1 302 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 PDZD7Q9H5P4 517 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 C10orf88Q9H8K7 445 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.13□□□□□ -0.47
CHERP-203ENST00000546361 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 A8MX80 341 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 DNALI1O14645 258 aaPredicted RBP12.13□□□□□ -0.47
CHERP-203ENST00000546361 ALDH1A2O94788 518 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 PYGBP11216 843 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 GABRR2P28476 465 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 GLUD2P49448 558 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 ESRRGP62508 458 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 POLR2LP62875 67 aaKnown RBP12.13□□□□□ -0.47
CHERP-203ENST00000546361 CREMQ03060 361 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 TLE2Q04725 743 aa12.13□□□□□ -0.47
CHERP-203ENST00000546361 PREPLQ4J6C6 727 aaPredicted RBP12.13□□□□□ -0.47
CHERP-203ENST00000546361 IRF2BP2Q7Z5L9 587 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms