RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 GRNP28799 593 aaKnown RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 RFC1P35251 1148 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 HADHAP40939 763 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ELK3P41970 407 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 CTSOP43234 321 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 PSMC4P43686 418 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ASPAP45381 313 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ACOT2P49753 483 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 BACE1P56817 501 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 YWHAGP61981 247 aaKnown RBP eCLIP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 BASP1P80723 227 aaKnown RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 TMPRSS15P98073 1019 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 OGDHQ02218 1023 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 DEUP1Q05D60 604 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 BTKQ06187 659 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 FAAP100Q0VG06 881 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ASPHQ12797 758 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 STX3Q13277 289 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 RCN2Q14257 317 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 TRIP4Q15650 581 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ADRM1Q16186 407 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 FAM187BQ17R55 369 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 KBTBD12Q3ZCT8 623 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 MTERF2Q49AM1 385 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 PTPN20Q4JDL3 420 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 TEX44Q53QW1 395 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 FSCBQ5H9T9 825 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF667Q5HYK9 610 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 MEX3CQ5U5Q3 659 aaKnown RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ANKRD22Q5VYY1 191 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ARMC3Q5W041 872 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 STEAP4Q687X5 459 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 NAIF1Q69YI7 327 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 SLC9A4Q6AI14 798 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 SPOPLQ6IQ16 392 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 MPZL3Q6UWV2 235 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 DSTYKQ6XUX3 929 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 MARK2Q7KZI7 788 aaKnown RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 BTLAQ7Z6A9 289 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 SETD3Q86TU7 594 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 XYLT1Q86Y38 959 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 NUDCD3Q8IVD9 361 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 CPXCR1Q8N123 301 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 LINC00528Q8N1L1 170 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 CCDC33Q8N5R6 958 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 OR5B17Q8NGF7 314 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 RFWD2Q8NHY2 731 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 TTC8Q8TAM2 541 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 PPP4R1Q8TF05 950 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 LZICQ8WZA0 190 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 TTC17Q96AE7 1141 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 FAF2Q96CS3 445 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 CMTM5Q96DZ9 223 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 FGD4Q96M96 766 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 RNF157Q96PX1 679 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 FAM111AQ96PZ2 611 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ZIC5Q96T25 663 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ACO2Q99798 780 aaKnown RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 EBNA1BP2Q99848 306 aaKnown RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 TARS2Q9BW92 718 aaKnown RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 TRIM4Q9C037 500 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 SDCBP2Q9H190 292 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 XYLT2Q9H1B5 865 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 Q9H521 79 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ASB7Q9H672 318 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 RPAP3Q9H6T3 665 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 NRDE2Q9H7Z3 1164 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ELP3Q9H9T3 547 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 DNAJC28Q9NX36 388 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 HOXC10Q9NYD6 342 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 PLK2Q9NYY3 685 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 DLGAP2Q9P1A6 1054 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 SLC17A7Q9P2U7 560 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ZC3H7BQ9UGR2 993 aaKnown RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 DCDC2Q9UHG0 476 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 GTF2IRD1Q9UHL9 959 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF112Q9UJU3 913 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 ADAM28Q9UKQ2 775 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 PLA2G4CQ9UP65 541 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 HBS1LQ9Y450 684 aaKnown RBP6.68□□□□□ -1.34
SNHG1-225ENST00000545920 TTLL3Q9Y4R7 772 aa6.68□□□□□ -1.34
SNHG1-225ENST00000545920 SIP14410 1827 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 IGKV6-21A0A0C4DH24 114 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 CLRN2A0PK11 232 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 TMEM150BA6NC51 233 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 SDR42E2A6NKP2 422 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 H7C0C1 242 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 AP3B1O00203 1094 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ACKR2O00590 384 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 CASQ2O14958 399 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 MSCO60682 206 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 KRT36O76013 467 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ALDH1A2O94788 518 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 RTN3O95197 1032 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ZBED1O96006 694 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 C1QAP02745 245 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 SERPINE1P05121 402 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 APOA4P06727 396 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 CYP2C8P10632 490 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ETS1P14921 441 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms