RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 CCDC97Q96F63 343 aaPredicted RBP16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 C8orf76Q96K31 380 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 SEMA3CQ99985 751 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 MED10Q9BTT4 135 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 EPN3Q9H201 632 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 PABPC3Q9H361 631 aaKnown RBP16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 PCIF1Q9H4Z3 704 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 TLR8Q9NR97 1041 aaKnown RBP16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 NCKAP1Q9Y2A7 1128 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 CDRT15L2A8MXV6 281 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 C10orf142B7Z368 130 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 FFAR2O15552 330 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 CYP26A1O43174 497 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 TACC1O75410 805 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 CST3P01034 146 aaPredicted RBP16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 HMBSP08397 361 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 PRPHP41219 470 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 PLA2G4AP47712 749 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 EHHADHQ08426 723 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 MAPK8IP2Q13387 824 aaPredicted RBP16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 TGIF1Q15583 401 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 SKIDA1Q1XH10 827 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 CCDC83Q8IWF9 413 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 ANKRD36BP1Q96IX9 119 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 SMOQ99835 787 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 CBWD1Q9BRT8 395 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 ST6GALNAC4Q9H4F1 302 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 DMAP1Q9NPF5 467 aaPredicted RBP16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 BLOC1S4Q9NUP1 217 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 PLA2G4CQ9UP65 541 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 C2CD3Q4AC94 2353 aa16.14■□□□□ 0.17
CLSTN3-216ENST00000545663 A0A1W2PP55 124 aa16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 TBCAO75347 108 aaKnown RBP16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 AP1G2O75843 785 aa16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 CKMT1AP12532 417 aa16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 RARGP13631 454 aa16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 GNL2Q13823 731 aaKnown RBP16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 TBR1Q16650 682 aa16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 C10orf120Q5SQS8 335 aa16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 ZNF776Q68DI1 518 aaPredicted RBP16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 GPRIN1Q7Z2K8 1008 aa16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 FAM26EQ8N5C1 309 aa16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 SGF29Q96ES7 293 aa16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 ABCG4Q9H172 646 aa16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 LRRC4CQ9HCJ2 640 aa16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 COMMD8Q9NX08 183 aa16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 AGO1Q9UL18 857 aaKnown RBP16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 ATXN7L1Q9ULK2 861 aaPredicted RBP16.13■□□□□ 0.17
CLSTN3-216ENST00000545663 LY6G6EA0A0G2JKS1 128 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 A0A1W2PQH9 124 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 VWA3AA6NCI4 1184 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 MID1O15344 667 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 RNASEH2AO75792 299 aaKnown RBP16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 PPP1R37O75864 691 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 GJB6O95452 261 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 TNNC2P02585 160 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 ITGB2P05107 769 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 GIMD1P0DJR0 217 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 ASIC1P78348 528 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 CLCA4Q14CN2 919 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 E2F5Q15329 346 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 USP30Q70CQ3 517 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 DYMQ7RTS9 669 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 ADIPOR2Q86V24 386 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 SFR1Q86XK3 245 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 OXR1Q8N573 874 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 KCTD17Q8N5Z5 321 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 OR2T34Q8NGX1 318 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 OR4C6Q8NH72 309 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 DDI1Q8WTU0 396 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 STRA6Q9BX79 667 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 BACH2Q9BYV9 841 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 RSPH9Q9H1X1 276 aaPredicted RBP16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 KRT82Q9NSB4 513 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 TBC1D7Q9P0N9 293 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 U3KQA8 63 aa16.12■□□□□ 0.17
CLSTN3-216ENST00000545663 CSMD1Q96PZ7 3565 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 SPENQ96T58 3664 aaKnown RBP16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 LRRC72A6NJI9 287 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 CASC3O15234 703 aaKnown RBP16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 NOBOXO60393 691 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 TNFSF15O95150 251 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 POU3F2P20265 443 aaPredicted RBP16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 TGM2P21980 687 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 DGKAP23743 735 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 HLA-FP30511 346 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 CORO1AP31146 461 aaKnown RBP16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 ABCD1P33897 745 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 CHKAP35790 457 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 DUSP3P51452 185 aaPredicted RBP16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 CCR5P51681 352 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 MAP3K7CLP57077 242 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 CYP4F2P78329 520 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 DUOXA2Q1HG44 320 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 WDR72Q3MJ13 1102 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 CHST9Q7L1S5 443 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 DENND1CQ8IV53 801 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 FUKQ8N0W3 1084 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms