RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	LIN7C	Q9NUP9	197 aa	Known RBP	4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	NDUFAF4	Q9P032	175 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	LUZP4	Q9P127	313 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	RAB21	Q9UL25	225 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	TRPC5	Q9UL62	973 aa	Predicted RBP	4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	LZTS1	Q9Y250	596 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	DGKB	Q9Y6T7	804 aa		4.8	□□□□□ -1.64
RAP1B-231	ENST00000544639	WIPF3	A6NGB9	483 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	TTC34	A8MYJ7	566 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	IRAK2	O43187	625 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	PRKCG	P05129	697 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	SLC3A2	P08195	630 aa	Known RBP	4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	CYP3A4	P08684	503 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	PEPD	P12955	493 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	FBL	P22087	321 aa	Known RBP	4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	SERPINA4	P29622	427 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	SLC8A1	P32418	973 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	GRK5	P34947	590 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	HOXD12	P35452	270 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	AGTR2	P50052	363 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	ARL4C	P56559	192 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	FOXL2	P58012	376 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	TAS2R50	P59544	299 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	RPS6KA2	Q15349	733 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	TAF5	Q15542	800 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	TMEM95	Q3KNT9	176 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	ZNF569	Q5MCW4	686 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	DGAT2L7P	Q6IED9	249 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	DPY19L2P1	Q6NXN4	242 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	RANBP10	Q6VN20	620 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	RINL	Q6ZS11	566 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	MOGAT3	Q86VF5	341 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	OR6Y1	Q8NGX8	325 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	SPPL3	Q8TCT6	385 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	ZNF398	Q8TD17	642 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	ASB12	Q8WXK4	309 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	DPF1	Q92782	380 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	SCLT1	Q96NL6	688 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	FAM167B	Q9BTA0	163 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	TWSG1	Q9GZX9	223 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	ABHD16B	Q9H3Z7	469 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	G6PC2	Q9NQR9	355 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	KIF17	Q9P2E2	1029 aa		4.79	□□□□□ -1.64
RAP1B-231	ENST00000544639	FAM90A20P	A6NIJ5	464 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	C3orf70	A6NLC5	250 aa	Predicted RBP	4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	RBMXL2	O75526	392 aa	Known RBP	4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	KAT7	O95251	611 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	LATS1	O95835	1130 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	ALDOA	P04075	364 aa	Known RBP	4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	CYP21A2	P08686	494 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	IGFBP2	P18065	325 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	STAT6	P42226	847 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	RNASEL	Q05823	741 aa	Known RBP	4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	SLC10A2	Q12908	348 aa	Predicted RBP	4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	PPFIA1	Q13136	1202 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	CUL4B	Q13620	913 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	KPNB1	Q14974	876 aa	Known RBP	4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	SEC23B	Q15437	767 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	TBRG1	Q3YBR2	411 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	CC2D1B	Q5T0F9	858 aa	Known RBP	4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	C8orf58	Q8NAV2	365 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	SLC2A12	Q8TD20	617 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	RILPL2	Q969X0	211 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	SDCCAG3	Q96C92	435 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	ZNF845	Q96IR2	970 aa	Predicted RBP	4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	SENP7	Q9BQF6	1050 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	NUAK2	Q9H093	628 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	SEPSECS	Q9HD40	501 aa	Known RBP	4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	ASNSD1	Q9NWL6	643 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	SLC12A4	Q9UP95	1085 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	B3GNT3	Q9Y2A9	372 aa		4.78	□□□□□ -1.64
RAP1B-231	ENST00000544639	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	TBC1D3D	A0A087WVF3	549 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	TBC1D3I	A0A087WXS9	549 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	TBC1D3E	A0A087X179	549 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	TBC1D3K	A0A087X1G2	549 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	TBC1D3B	A6NDS4	549 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639		B9A039	149 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	TBC1D3L	B9A6J9	549 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	HEXIM1	O94992	359 aa	Known RBP	4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	TBC1D3H	P0C7X1	549 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	CYP3A7	P24462	503 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	VPS41	P49754	854 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	ZNF84	P51523	738 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	DMWD	Q09019	674 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	SMAD1	Q15797	465 aa	Known RBP	4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	PFKFB3	Q16875	520 aa	Predicted RBP	4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	ADCK5	Q3MIX3	580 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	TBC1D3G	Q6DHY5	549 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	TBC1D3C	Q6IPX1	549 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	SLC39A5	Q6ZMH5	540 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	ZNF813	Q6ZN06	617 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	ZNF66	Q6ZN08	573 aa		4.77	□□□□□ -1.65
RAP1B-231	ENST00000544639	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.77	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms