RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 HEBP1Q9NRV9 189 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 USP18Q9UMW8 372 aa15□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MACROD2A1Z1Q3 448 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TYW5A2RUC4 315 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 OTOL1A6NHN0 477 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 NEDD8-MDP1E9PL57 170 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 F5H5T6 163 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TSPAN3O60637 253 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 PROSCO94903 275 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ADH5P11766 374 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TACR2P21452 398 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MIPP30301 263 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SLC6A4P31645 630 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ADRA1BP35368 520 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 PCK1P35558 622 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 GAD2Q05329 585 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MS4A13Q5J8X5 152 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 PIK3R6Q5UE93 754 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 RHBDF2Q6PJF5 856 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TMEM25Q86YD3 366 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 FAM217AQ8IXS0 508 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 LGI2Q8N0V4 545 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ARFGAP1Q8N6T3 406 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 DDI1Q8WTU0 396 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 HAPLN3Q96S86 360 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 BBS2Q9BXC9 721 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TSGA10Q9BZW7 698 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 CA14Q9ULX7 337 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 HS3ST4Q9Y661 456 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 DUSP10Q9Y6W6 482 aa14.99□□□□□ -0.01
TNFRSF1A-216ENST00000543995 A0A0U1RQJ8 604 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 BTNL10A8MVZ5 291 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 KRT86O43790 486 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 GGCXP38435 758 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 AIF1P55008 147 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 HADHBP55084 474 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 AMPD2Q01433 879 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 HADHQ16836 314 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MPPE1Q53F39 396 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SLC44A4Q53GD3 710 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 EFHC2Q5JST6 749 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ATRIPQ8WXE1 791 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 NTAN1Q96AB6 310 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TMA16Q96EY4 203 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 CALR3Q96L12 384 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 PLK2Q9NYY3 685 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SALL4Q9UJQ4 1053 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 VANGL2Q9ULK5 521 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 FZD10Q9ULW2 581 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 PIAS3Q9Y6X2 628 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 COL4A2P08572 1712 aa14.98□□□□□ -0.01
TNFRSF1A-216ENST00000543995 I6L893 689 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 DCXO43602 365 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SRGAP2O75044 1071 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TYRP14679 529 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MAN1A1P33908 653 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 GJA4P35212 333 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 GJC1P36383 396 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SOX9P48436 509 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ZXDAP98168 799 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 AUHQ13825 339 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 IFI16Q16666 785 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ERMARDQ5T6L9 678 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ACBD5Q5T8D3 534 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 LRRC31Q6UY01 552 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 C1orf74Q96LT6 269 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 PEBP4Q96S96 227 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 C8orf33Q9H7E9 229 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 ZWILCHQ9H900 591 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 WNT16Q9UBV4 365 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TRIM10Q9UDY6 481 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 OR12D3Q9UGF7 316 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 GUCA1BQ9UMX6 200 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 AP4E1Q9UPM8 1137 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 PPP2R2CQ9Y2T4 447 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SNX10Q9Y5X0 201 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MIA3Q5JRA6 1907 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SPOPO43791 374 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 BUB1BO60566 1050 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TBL1XO60907 577 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TCF4P15884 667 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SLC1A1P43005 524 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SGSHP51688 502 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MLLT6P55198 1093 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SCAPQ12770 1279 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 MLF2Q15773 248 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 SMTNL2Q2TAL5 461 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 RABGAP1LQ5R372 815 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 FBXL22Q6P050 247 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TPRG1Q6ZUI0 275 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 DAAM2Q86T65 1068 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 CPNE8Q86YQ8 564 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 CFAP52Q8N1V2 620 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 NAT16Q8N8M0 369 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 HJURPQ8NCD3 748 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 TPCN2Q8NHX9 752 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 HSPH1Q92598 858 aa14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 PRICKLE1Q96MT3 831 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 RPRD1AQ96P16 312 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-216ENST00000543995 XPO6Q96QU8 1125 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms